RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 SOX13Q9UN79 622 aa8.79□□□□□ -1
CLPX-202ENST00000558103 TRAK1Q9UPV9 953 aa8.79□□□□□ -1
CLPX-202ENST00000558103 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
CLPX-202ENST00000558103 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
CLPX-202ENST00000558103 DISP2A7MBM2 1401 aa8.79□□□□□ -1
CLPX-202ENST00000558103 QRICH2Q9H0J4 1663 aa8.78□□□□□ -1
CLPX-202ENST00000558103 PARP4Q9UKK3 1724 aaKnown RBP8.78□□□□□ -1
CLPX-202ENST00000558103 FSCN2O14926 492 aa8.78□□□□□ -1
CLPX-202ENST00000558103 TREHO43280 583 aa8.78□□□□□ -1
CLPX-202ENST00000558103 CABP4P57796 275 aa8.78□□□□□ -1
CLPX-202ENST00000558103 ADGRE1Q14246 886 aa8.78□□□□□ -1
CLPX-202ENST00000558103 TXNDC11Q6PKC3 985 aa8.78□□□□□ -1
CLPX-202ENST00000558103 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
CLPX-202ENST00000558103 CCDC74AQ96AQ1 378 aa8.78□□□□□ -1
CLPX-202ENST00000558103 ASB16Q96NS5 453 aa8.78□□□□□ -1
CLPX-202ENST00000558103 GOLGA2P5Q9HBQ8 144 aa8.78□□□□□ -1
CLPX-202ENST00000558103 BTG4Q9NY30 223 aa8.78□□□□□ -1
CLPX-202ENST00000558103 SPATA31A5Q5VU36 1347 aa8.78□□□□□ -1
CLPX-202ENST00000558103 SPATA31A7Q8IWB4 1347 aa8.78□□□□□ -1
CLPX-202ENST00000558103 H3BRJ5 948 aa8.77□□□□□ -1.01
CLPX-202ENST00000558103 MBTPS1Q14703 1052 aa8.77□□□□□ -1.01
CLPX-202ENST00000558103 CCNJLQ8IV13 435 aa8.77□□□□□ -1.01
CLPX-202ENST00000558103 WNT8BQ93098 351 aa8.77□□□□□ -1.01
CLPX-202ENST00000558103 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1.01
CLPX-202ENST00000558103 SBF2Q86WG5 1849 aa8.77□□□□□ -1.01
CLPX-202ENST00000558103 RGPD3A6NKT7 1758 aaPredicted RBP8.76□□□□□ -1.01
CLPX-202ENST00000558103 RGPD4Q7Z3J3 1758 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 POLR3AO14802 1390 aaPredicted RBP8.76□□□□□ -1.01
CLPX-202ENST00000558103 TM4SF5O14894 197 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 CD68P34810 354 aaPredicted RBP8.76□□□□□ -1.01
CLPX-202ENST00000558103 VN1R5Q7Z5H4 357 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 KLHL23Q8NBE8 558 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 ASAP3Q8TDY4 903 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 TCF12Q99081 682 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 LIN7BQ9HAP6 207 aa8.76□□□□□ -1.01
CLPX-202ENST00000558103 KIAA0232Q92628 1395 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 PEAK1Q9H792 1746 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 SND1Q7KZF4 910 aaKnown RBP eCLIP8.75□□□□□ -1.01
CLPX-202ENST00000558103 TMEM130Q8N3G9 435 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 KLHDC7BQ96G42 594 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
CLPX-202ENST00000558103 EHD4Q9H223 541 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 NPHS2Q9NP85 383 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 OSGEPQ9NPF4 335 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 SEC31BQ9NQW1 1179 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 SPATA31A1Q5TZJ5 1347 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 CAMTA1Q9Y6Y1 1673 aa8.75□□□□□ -1.01
CLPX-202ENST00000558103 AKAP12Q02952 1782 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 LRRC37A3O60309 1634 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 METTL12A8MUP2 240 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 NGDNQ8NEJ9 315 aaKnown RBP8.74□□□□□ -1.01
CLPX-202ENST00000558103 WFDC12Q8WWY7 111 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 KRTAP4-7Q9BYR0 210 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 KCNK4Q9NYG8 393 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 PIK3C2AO00443 1686 aa8.74□□□□□ -1.01
CLPX-202ENST00000558103 COL18A1P39060 1754 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 RGPD5Q99666 1765 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 TRPM1Q7Z4N2 1603 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 SSH2Q76I76 1423 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 A0A096LPE4 126 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 SOX1O00570 391 aaPredicted RBP8.73□□□□□ -1.01
CLPX-202ENST00000558103 GRIA4P48058 902 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 ARL4DP49703 201 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 IKBKEQ14164 716 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 ENOX2Q16206 610 aaKnown RBP8.73□□□□□ -1.01
CLPX-202ENST00000558103 SPRED3Q2MJR0 410 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 EPS8L3Q8TE67 593 aaKnown RBP8.73□□□□□ -1.01
CLPX-202ENST00000558103 ZFP64Q9NPA5 681 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 PRDM11Q9NQV5 511 aa8.73□□□□□ -1.01
CLPX-202ENST00000558103 SLIT3O75094 1523 aa8.72□□□□□ -1.01
CLPX-202ENST00000558103 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
CLPX-202ENST00000558103 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
CLPX-202ENST00000558103 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
CLPX-202ENST00000558103 USP19O94966 1318 aa8.72□□□□□ -1.01
CLPX-202ENST00000558103 CPDO75976 1380 aa8.72□□□□□ -1.01
CLPX-202ENST00000558103 COL5A2P05997 1499 aaPredicted RBP8.71□□□□□ -1.01
CLPX-202ENST00000558103 PNMA6FA0A0J9YX94 578 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 DDX3YO15523 660 aaKnown RBP8.71□□□□□ -1.02
CLPX-202ENST00000558103 ESRRAP11474 423 aaPredicted RBP8.71□□□□□ -1.02
CLPX-202ENST00000558103 NOS3P29474 1203 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 FMR1Q06787 632 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLPX-202ENST00000558103 C19orf57Q0VDD7 668 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 CHRNA2Q15822 529 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 ARTNQ5T4W7 220 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 HGSNATQ68CP4 663 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 NBPF11Q86T75 865 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 CDK19Q9BWU1 502 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 NLRP2Q9NX02 1062 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 ACEP12821 1306 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 PARD3Q8TEW0 1356 aa8.71□□□□□ -1.02
CLPX-202ENST00000558103 USP54Q70EL1 1684 aa8.7□□□□□ -1.02
CLPX-202ENST00000558103 F8W735 103 aaPredicted RBP8.7□□□□□ -1.02
CLPX-202ENST00000558103 ALX3O95076 343 aa8.7□□□□□ -1.02
CLPX-202ENST00000558103 SOX17Q9H6I2 414 aaPredicted RBP8.7□□□□□ -1.02
CLPX-202ENST00000558103 MON2Q7Z3U7 1717 aa8.7□□□□□ -1.02
CLPX-202ENST00000558103 PPIP5K1Q6PFW1 1433 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms