RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 DBNLQ9UJU6 430 aaKnown RBP13.91□□□□□ -0.18
LINC00648-204ENST00000557749 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
LINC00648-204ENST00000557749 VPS9D1Q9Y2B5 631 aa13.91□□□□□ -0.18
LINC00648-204ENST00000557749 RFX7Q2KHR2 1363 aa13.91□□□□□ -0.18
LINC00648-204ENST00000557749 CCL15-CCL14A0A0B4J2E2 113 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
LINC00648-204ENST00000557749 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 NFIAQ12857 509 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 CCL15Q16663 113 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 ERO1AQ96HE7 468 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 PICK1Q9NRD5 415 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 EXOC6BQ9Y2D4 811 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 ATRNL1Q5VV63 1379 aa13.9□□□□□ -0.18
LINC00648-204ENST00000557749 TBC1D8O95759 1140 aa13.89□□□□□ -0.19
LINC00648-204ENST00000557749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00648-204ENST00000557749 ZNF296Q8WUU4 475 aaPredicted RBP13.89□□□□□ -0.19
LINC00648-204ENST00000557749 EAF2Q96CJ1 260 aaPredicted RBP13.89□□□□□ -0.19
LINC00648-204ENST00000557749 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
LINC00648-204ENST00000557749 DOCK2Q92608 1830 aa13.89□□□□□ -0.19
LINC00648-204ENST00000557749 TULP1O00294 542 aaPredicted RBP13.88□□□□□ -0.19
LINC00648-204ENST00000557749 PRSS12P56730 875 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 PPP4CP60510 307 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 MAP3K10Q02779 954 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 PICALMQ13492 652 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 PI16Q6UXB8 463 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 MIGA2Q7L4E1 593 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 CCDC8Q9H0W5 538 aaPredicted RBP13.88□□□□□ -0.19
LINC00648-204ENST00000557749 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
LINC00648-204ENST00000557749 HERC5Q9UII4 1024 aaKnown RBP13.88□□□□□ -0.19
LINC00648-204ENST00000557749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.88□□□□□ -0.19
LINC00648-204ENST00000557749 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
LINC00648-204ENST00000557749 CXCL11O14625 94 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 HRO43593 1189 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 CTNND1O60716 968 aaKnown RBP13.87□□□□□ -0.19
LINC00648-204ENST00000557749 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
LINC00648-204ENST00000557749 RHBDL3P58872 404 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 ADGRD1Q6QNK2 874 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 SCYL3Q8IZE3 742 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 ZKSCAN4Q969J2 545 aaPredicted RBP13.87□□□□□ -0.19
LINC00648-204ENST00000557749 TRIM34Q9BYJ4 488 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
LINC00648-204ENST00000557749 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
LINC00648-204ENST00000557749 CCDC85CA6NKD9 419 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 BHMG1C9JSJ3 638 aaPredicted RBP13.86□□□□□ -0.19
LINC00648-204ENST00000557749 TK2O00142 265 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 IRF6O14896 467 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
LINC00648-204ENST00000557749 HLA-DOAP06340 250 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 GJA5P36382 358 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 ZAP70P43403 619 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
LINC00648-204ENST00000557749 PADI6Q6TGC4 694 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 FASTKD5Q7L8L6 764 aaKnown RBP13.86□□□□□ -0.19
LINC00648-204ENST00000557749 GPATCH3Q96I76 525 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 PI4KBQ9UBF8 816 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 KCNH4Q9UQ05 1017 aa13.86□□□□□ -0.19
LINC00648-204ENST00000557749 TRIM6-TRIM34B2RNG4 842 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 GNRH1P01148 92 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 INPP5BP32019 993 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 SP3Q02447 781 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 CRHR2Q13324 411 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 KIF22Q14807 665 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 FBXO46Q6PJ61 603 aaPredicted RBP13.85□□□□□ -0.19
LINC00648-204ENST00000557749 ANKRD23Q86SG2 305 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 BRI3BPQ8WY22 251 aa13.85□□□□□ -0.19
LINC00648-204ENST00000557749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00648-204ENST00000557749 AATFQ9NY61 560 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00648-204ENST00000557749 CYP7A1P22680 504 aa13.84□□□□□ -0.19
LINC00648-204ENST00000557749 AAMPQ13685 434 aa13.84□□□□□ -0.19
LINC00648-204ENST00000557749 HIC1Q14526 733 aa13.84□□□□□ -0.19
LINC00648-204ENST00000557749 FOXP4Q8IVH2 680 aaPredicted RBP13.84□□□□□ -0.19
LINC00648-204ENST00000557749 ZNF384Q8TF68 577 aa13.84□□□□□ -0.19
LINC00648-204ENST00000557749 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
LINC00648-204ENST00000557749 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC00648-204ENST00000557749 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
LINC00648-204ENST00000557749 DDX4Q9NQI0 724 aaKnown RBP13.84□□□□□ -0.19
LINC00648-204ENST00000557749 TLR7Q9NYK1 1049 aaKnown RBP13.84□□□□□ -0.19
LINC00648-204ENST00000557749 SLC45A1Q9Y2W3 748 aa13.84□□□□□ -0.19
LINC00648-204ENST00000557749 DDTLA6NHG4 134 aaPredicted RBP13.83□□□□□ -0.2
LINC00648-204ENST00000557749 PHF20L1A8MW92 1017 aa13.83□□□□□ -0.2
LINC00648-204ENST00000557749 ZMYND10O75800 440 aa13.83□□□□□ -0.2
LINC00648-204ENST00000557749 PTPN18Q99952 460 aa13.83□□□□□ -0.2
LINC00648-204ENST00000557749 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.2
LINC00648-204ENST00000557749 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
LINC00648-204ENST00000557749 APBB1O00213 710 aa13.82□□□□□ -0.2
LINC00648-204ENST00000557749 TLR2O60603 784 aa13.82□□□□□ -0.2
LINC00648-204ENST00000557749 PTPRAP18433 802 aa13.82□□□□□ -0.2
LINC00648-204ENST00000557749 PABPC4Q13310 644 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC00648-204ENST00000557749 ZSCAN25Q6NSZ9 544 aa13.82□□□□□ -0.2
LINC00648-204ENST00000557749 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
LINC00648-204ENST00000557749 ZFPM1Q8IX07 1006 aa13.82□□□□□ -0.2
LINC00648-204ENST00000557749 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms