RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
NEK9-211ENST00000557673 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
NEK9-211ENST00000557673 EAF2Q96CJ1 260 aaPredicted RBP20.25■□□□□ 0.83
NEK9-211ENST00000557673 PAWRQ96IZ0 340 aaKnown RBP20.25■□□□□ 0.83
NEK9-211ENST00000557673 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.25■□□□□ 0.83
NEK9-211ENST00000557673 CCDC8Q9H0W5 538 aaPredicted RBP20.25■□□□□ 0.83
NEK9-211ENST00000557673 ASCC2Q9H1I8 757 aaPredicted RBP20.25■□□□□ 0.83
NEK9-211ENST00000557673 SZT2Q5T011 3432 aa20.25■□□□□ 0.83
NEK9-211ENST00000557673 PHIPQ8WWQ0 1821 aa20.25■□□□□ 0.83
NEK9-211ENST00000557673 MAST2Q6P0Q8 1798 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 ASNSP08243 561 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 IRX3P78415 501 aaPredicted RBP20.23■□□□□ 0.83
NEK9-211ENST00000557673 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 TRIM34Q9BYJ4 488 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 HMX1Q9NP08 348 aaPredicted RBP20.23■□□□□ 0.83
NEK9-211ENST00000557673 GINM1Q9NU53 330 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 TMOD4Q9NZQ9 345 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 RPTORQ8N122 1335 aa20.23■□□□□ 0.83
NEK9-211ENST00000557673 MYO5AQ9Y4I1 1855 aaKnown RBP20.22■□□□□ 0.83
NEK9-211ENST00000557673 IGSF3O75054 1194 aa20.22■□□□□ 0.83
NEK9-211ENST00000557673 HDAC1Q13547 482 aaPredicted RBP20.22■□□□□ 0.83
NEK9-211ENST00000557673 MORF4L1Q9UBU8 362 aa20.22■□□□□ 0.83
NEK9-211ENST00000557673 GJD2Q9UKL4 321 aa20.22■□□□□ 0.83
NEK9-211ENST00000557673 C19orf81C9J6K1 198 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 RAB11FIP3O75154 756 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 BACE1P56817 501 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 NAA16Q6N069 864 aaPredicted RBP20.21■□□□□ 0.83
NEK9-211ENST00000557673 AACSQ86V21 672 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 FOXP4Q8IVH2 680 aaPredicted RBP20.21■□□□□ 0.83
NEK9-211ENST00000557673 RHPN1Q8TCX5 695 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
NEK9-211ENST00000557673 KIF1BPQ96EK5 621 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
NEK9-211ENST00000557673 NBPF3Q9H094 633 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 IL1RAPL2Q9NP60 686 aa20.21■□□□□ 0.83
NEK9-211ENST00000557673 CYP2E1P05181 493 aaPredicted RBP20.2■□□□□ 0.82
NEK9-211ENST00000557673 HOXA7P31268 230 aaPredicted RBP20.2■□□□□ 0.82
NEK9-211ENST00000557673 ZAP70P43403 619 aa20.2■□□□□ 0.82
NEK9-211ENST00000557673 MTMR2Q13614 643 aa20.2■□□□□ 0.82
NEK9-211ENST00000557673 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
NEK9-211ENST00000557673 DCTPP1Q9H773 170 aa20.2■□□□□ 0.82
NEK9-211ENST00000557673 STAP2Q9UGK3 403 aa20.2■□□□□ 0.82
NEK9-211ENST00000557673 DOCK3Q8IZD9 2030 aa20.19■□□□□ 0.82
NEK9-211ENST00000557673 LOC285556D6RIA3 1793 aa20.19■□□□□ 0.82
NEK9-211ENST00000557673 APBB1O00213 710 aa20.19■□□□□ 0.82
NEK9-211ENST00000557673 PPP4CP60510 307 aa20.19■□□□□ 0.82
NEK9-211ENST00000557673 RRP1BQ14684 758 aaKnown RBP20.19■□□□□ 0.82
NEK9-211ENST00000557673 CRACR2BQ8N4Y2 399 aaPredicted RBP20.19■□□□□ 0.82
NEK9-211ENST00000557673 GPRC5AQ8NFJ5 357 aa20.19■□□□□ 0.82
NEK9-211ENST00000557673 GTF3C2Q8WUA4 911 aaPredicted RBP20.19■□□□□ 0.82
NEK9-211ENST00000557673 SOCS4Q8WXH5 440 aa20.19■□□□□ 0.82
NEK9-211ENST00000557673 AATFQ9NY61 560 aaKnown RBP eCLIP20.19■□□□□ 0.82
NEK9-211ENST00000557673 XRCC5P13010 732 aaKnown RBP20.18■□□□□ 0.82
NEK9-211ENST00000557673 BMP8BP34820 402 aa20.18■□□□□ 0.82
NEK9-211ENST00000557673 METTL16Q86W50 562 aaKnown RBP20.18■□□□□ 0.82
NEK9-211ENST00000557673 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
NEK9-211ENST00000557673 DIS3LQ8TF46 1054 aaKnown RBP20.18■□□□□ 0.82
NEK9-211ENST00000557673 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
NEK9-211ENST00000557673 NUDT12Q9BQG2 462 aa20.18■□□□□ 0.82
NEK9-211ENST00000557673 PIH1D3Q9NQM4 214 aaKnown RBP20.18■□□□□ 0.82
NEK9-211ENST00000557673 USP17L10C9JJH3 530 aa20.17■□□□□ 0.82
NEK9-211ENST00000557673 MAPK4P31152 587 aa20.17■□□□□ 0.82
NEK9-211ENST00000557673 P2RX7Q99572 595 aaKnown RBP20.17■□□□□ 0.82
NEK9-211ENST00000557673 LRRCC1Q9C099 1032 aa20.17■□□□□ 0.82
NEK9-211ENST00000557673 C11orf49Q9H6J7 331 aa20.17■□□□□ 0.82
NEK9-211ENST00000557673 NDUFB9Q9Y6M9 179 aa20.17■□□□□ 0.82
NEK9-211ENST00000557673 HLA-DOAP06340 250 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 HERVK_113P62684 666 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 ADGRA1Q86SQ6 560 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 CERS3Q8IU89 383 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 MAPKAPK5Q8IW41 473 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 C7orf61Q8IZ16 206 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 OGDHLQ9ULD0 1010 aa20.16■□□□□ 0.82
NEK9-211ENST00000557673 CYP2B6P20813 491 aa20.15■□□□□ 0.82
NEK9-211ENST00000557673 GPR153Q6NV75 609 aa20.15■□□□□ 0.82
NEK9-211ENST00000557673 SLC17A8Q8NDX2 589 aa20.15■□□□□ 0.82
NEK9-211ENST00000557673 TRIB2Q92519 343 aa20.15■□□□□ 0.82
NEK9-211ENST00000557673 GDF15Q99988 308 aa20.15■□□□□ 0.82
NEK9-211ENST00000557673 FLT1P17948 1338 aa20.15■□□□□ 0.82
NEK9-211ENST00000557673 ATAD5Q96QE3 1844 aa20.14■□□□□ 0.81
NEK9-211ENST00000557673 PRKAR2AP13861 404 aaKnown RBP20.14■□□□□ 0.81
NEK9-211ENST00000557673 TRIM32Q13049 653 aa20.14■□□□□ 0.81
NEK9-211ENST00000557673 MAP3K21Q5TCX8 1036 aa20.14■□□□□ 0.81
NEK9-211ENST00000557673 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.81
NEK9-211ENST00000557673 RWDD1Q9H446 243 aaPredicted RBP20.14■□□□□ 0.81
NEK9-211ENST00000557673 PALD1Q9ULE6 856 aa20.14■□□□□ 0.81
NEK9-211ENST00000557673 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
NEK9-211ENST00000557673 SMARCA5O60264 1052 aaPredicted RBP20.13■□□□□ 0.81
NEK9-211ENST00000557673 IDH1O75874 414 aaKnown RBP20.13■□□□□ 0.81
NEK9-211ENST00000557673 NEFLP07196 543 aa20.13■□□□□ 0.81
NEK9-211ENST00000557673 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
NEK9-211ENST00000557673 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
NEK9-211ENST00000557673 ZBTB21Q9ULJ3 1066 aa20.13■□□□□ 0.81
NEK9-211ENST00000557673 SOX1O00570 391 aaPredicted RBP20.12■□□□□ 0.81
NEK9-211ENST00000557673 GDF11O95390 407 aa20.12■□□□□ 0.81
NEK9-211ENST00000557673 IGHDP01880 384 aa20.12■□□□□ 0.81
NEK9-211ENST00000557673 RGS2P41220 211 aa20.12■□□□□ 0.81
NEK9-211ENST00000557673 ERVK-9P63128 1117 aa20.12■□□□□ 0.81
NEK9-211ENST00000557673 ERVK-24P63145 666 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms