RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 KRT23Q9C075 422 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
RIPK3-206ENST00000557624 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
RIPK3-206ENST00000557624 PHF20L1A8MW92 1017 aa16.72■□□□□ 0.27
RIPK3-206ENST00000557624 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
RIPK3-206ENST00000557624 AKR1B1P15121 316 aa16.72■□□□□ 0.27
RIPK3-206ENST00000557624 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
RIPK3-206ENST00000557624 ANAPC15P60006 121 aa16.72■□□□□ 0.27
RIPK3-206ENST00000557624 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
RIPK3-206ENST00000557624 SHROOM1Q2M3G4 852 aaPredicted RBP16.72■□□□□ 0.27
RIPK3-206ENST00000557624 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
RIPK3-206ENST00000557624 ESR2Q92731 530 aa16.72■□□□□ 0.27
RIPK3-206ENST00000557624 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
RIPK3-206ENST00000557624 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 INPP5BP32019 993 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
RIPK3-206ENST00000557624 TFAP4Q01664 338 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 COL9A3Q14050 684 aaPredicted RBP16.71■□□□□ 0.27
RIPK3-206ENST00000557624 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 GBA2Q9HCG7 927 aaPredicted RBP16.71■□□□□ 0.27
RIPK3-206ENST00000557624 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
RIPK3-206ENST00000557624 PASKQ96RG2 1323 aa16.71■□□□□ 0.27
RIPK3-206ENST00000557624 OTOFQ9HC10 1997 aa16.71■□□□□ 0.26
RIPK3-206ENST00000557624 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
RIPK3-206ENST00000557624 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 ARMC9Q7Z3E5 817 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
RIPK3-206ENST00000557624 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 PAPPA2Q9BXP8 1791 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 GH2P01242 217 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 CPA1P15085 419 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 PSMA5P28066 241 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 CAP2P40123 477 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 JAG1P78504 1218 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 FSTL1Q12841 308 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 CST9Q5W186 159 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 CHST3Q7LGC8 479 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
RIPK3-206ENST00000557624 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
RIPK3-206ENST00000557624 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
RIPK3-206ENST00000557624 ZSWIM5Q9P217 1185 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.7■□□□□ 0.26
RIPK3-206ENST00000557624 ZNF112Q9UJU3 913 aa16.7■□□□□ 0.26
RIPK3-206ENST00000557624 DOCK1Q14185 1865 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 UBE2Q2LH0YL09 131 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 CTNND1O60716 968 aaKnown RBP16.69■□□□□ 0.26
RIPK3-206ENST00000557624 RAB3GAP1Q15042 981 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 C2orf69Q8N8R5 385 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 TCEANC2Q96MN5 208 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
RIPK3-206ENST00000557624 NMT2O60551 498 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 HMGB1P09429 215 aaKnown RBP16.68■□□□□ 0.26
RIPK3-206ENST00000557624 DEKP35659 375 aaKnown RBP16.68■□□□□ 0.26
RIPK3-206ENST00000557624 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 VGLL4Q14135 290 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 CLEC10AQ8IUN9 316 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 NEDD1Q8NHV4 660 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 KIF2CQ99661 725 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 CSADQ9Y600 493 aa16.68■□□□□ 0.26
RIPK3-206ENST00000557624 PRC1O43663 620 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 ASNSP08243 561 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 MCM5P33992 734 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 ANTXR2P58335 489 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 FKBP1BP68106 108 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 SEPT2Q15019 361 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 MAP3K11Q16584 847 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
RIPK3-206ENST00000557624 TMEM179Q6ZVK1 233 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 IQCA1Q86XH1 822 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 CLMNQ96JQ2 1002 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 UBAC1Q9BSL1 405 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
RIPK3-206ENST00000557624 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 PICK1Q9NRD5 415 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 CYP46A1Q9Y6A2 500 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
RIPK3-206ENST00000557624 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
RIPK3-206ENST00000557624 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
RIPK3-206ENST00000557624 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 LRRC2Q9BYS8 371 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
RIPK3-206ENST00000557624 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 GUCY1A2P33402 732 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 NT5C2P49902 561 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 ATP2B2Q01814 1243 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 IL17RBQ9NRM6 502 aa16.66■□□□□ 0.26
RIPK3-206ENST00000557624 SNCAIPQ9Y6H5 919 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms