RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 MPHOSPH8Q99549 860 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 SEMA6BQ9H3T3 888 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 SPTLC1O15269 473 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 CYP2C8P10632 490 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 IL1R1P14778 569 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 GCGRP47871 477 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 CLK2P49760 499 aaKnown RBP8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 RIPK4P57078 832 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 COPS2P61201 443 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 USP46P62068 366 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 MYLIPQ8WY64 445 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 LBHD1Q9BQE6 289 aaPredicted RBP8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 KCNH4Q9UQ05 1017 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 A0A1B0GUL6 1792 aa8.66□□□□□ -1.02
SPTLC2-206ENST00000557566 SYNGAP1Q96PV0 1343 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 AK9Q5TCS8 1911 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 HMGCRP04035 888 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 CHRNDQ07001 517 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 DCAF15Q66K64 600 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 C15orf52Q6ZUT6 534 aaKnown RBP8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 COA7Q96BR5 231 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 HMX1Q9NP08 348 aaPredicted RBP8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 POLR3EQ9NVU0 708 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 TTF2Q9UNY4 1162 aaKnown RBP8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 JAG2Q9Y219 1238 aa8.65□□□□□ -1.02
SPTLC2-206ENST00000557566 PFASO15067 1338 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 CHL1O00533 1208 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 KDM4AO75164 1064 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 FLIIQ13045 1269 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 MOGSQ13724 837 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 MFSD14BQ5SR56 506 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 METTL22Q9BUU2 404 aaPredicted RBP8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 ZNF341Q9BYN7 854 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 TMOD2Q9NZR1 351 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 OGDHLQ9ULD0 1010 aa8.64□□□□□ -1.03
SPTLC2-206ENST00000557566 RPAP1Q9BWH6 1393 aaPredicted RBP8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 DDX58O95786 925 aaKnown RBP8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 ITGA6P23229 1130 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 CRKP46108 304 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 FUT2Q10981 343 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 PPP2R2DQ66LE6 453 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 GPAT2Q6NUI2 795 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 FAM83AQ86UY5 434 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 SMCR8Q8TEV9 937 aaPredicted RBP8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 PHAXQ9H814 394 aaKnown RBP8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 LAS1LQ9Y4W2 734 aaKnown RBP8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 MAST2Q6P0Q8 1798 aa8.63□□□□□ -1.03
SPTLC2-206ENST00000557566 LTBP2Q14767 1821 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 SNAP23O00161 211 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 CXCL11O14625 94 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 ACTN4O43707 911 aaKnown RBP8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 TAF5LO75529 589 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 INPP5BP32019 993 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 LRRC26Q2I0M4 334 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 DUSP27Q5VZP5 1158 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 FASTKD5Q7L8L6 764 aaKnown RBP8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 C1QTNF1Q9BXJ1 281 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 TTYH1Q9H313 450 aaPredicted RBP8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 HCN4Q9Y3Q4 1203 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 PTPRFP10586 1907 aa8.62□□□□□ -1.03
SPTLC2-206ENST00000557566 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 COL6A1P12109 1028 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 CACNB3P54284 484 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 SMAD3P84022 425 aaKnown RBP8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 FKBP1CQ5VVH2 108 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 MIGA2Q7L4E1 593 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 MTRQ99707 1265 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 PRKAG2Q9UGJ0 569 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 SLC45A1Q9Y2W3 748 aa8.61□□□□□ -1.03
SPTLC2-206ENST00000557566 A0A0G2JLL6 359 aaPredicted RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 HOXA2O43364 376 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 TMPOP42166 694 aaKnown RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 NEXNQ0ZGT2 675 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 FAM110CQ1W6H9 321 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 NOL9Q5SY16 702 aaKnown RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 BLOC1S3Q6QNY0 202 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 PRRT2Q7Z6L0 340 aaPredicted RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 USP38Q8NB14 1042 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 ADAMTS19Q8TE59 1207 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 ATXN2LQ8WWM7 1075 aaKnown RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 TEKT1Q969V4 418 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 SNX27Q96L92 541 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 UHRF1Q96T88 793 aaPredicted RBP8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 ZNF112Q9UJU3 913 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 MAP3K2Q9Y2U5 619 aa8.6□□□□□ -1.03
SPTLC2-206ENST00000557566 FRMPD3Q5JV73 1810 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 ANKRD18BA2A2Z9 1011 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 IGKV5-2P06315 115 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 TRIM32Q13049 653 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 SHHQ15465 462 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 GADL1Q6ZQY3 521 aa8.59□□□□□ -1.03
SPTLC2-206ENST00000557566 UBE3BQ7Z3V4 1068 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms