RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 ENAHQ8N8S7 591 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 VEZTQ9HBM0 779 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 NID2Q14112 1375 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
ARHGEF40-208ENST00000557498 H7C1D1 291 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 ZBTB43O43298 467 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 TSPY3P0CV98 308 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 TSPY8P0CW00 308 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 CCT2P78371 535 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 KIF4BQ2VIQ3 1234 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 CCDC178Q5BJE1 867 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 FAM83AQ86UY5 434 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 LLPHQ9BRT6 129 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 TCP11L1Q9NUJ3 509 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 GPRC5DQ9NZD1 345 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 PI4KBQ9UBF8 816 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 SLC12A7Q9Y666 1083 aa16.97■□□□□ 0.31
ARHGEF40-208ENST00000557498 GRIN3BO60391 1043 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 EGFRP00533 1210 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 SHMT1P34896 483 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 RCAN1P53805 252 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 RBM26Q5T8P6 1007 aaKnown RBP16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 SAMD7Q7Z3H4 446 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 FOXP4Q8IVH2 680 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 CRACR2BQ8N4Y2 399 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 NEDD1Q8NHV4 660 aa16.96■□□□□ 0.31
ARHGEF40-208ENST00000557498 GREB1LQ9C091 1923 aaPredicted RBP16.96■□□□□ 0.3
ARHGEF40-208ENST00000557498 NMT2O60551 498 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 GJB2P29033 226 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 METAP2P50579 478 aaKnown RBP eCLIP16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 METTL16Q86W50 562 aaKnown RBP16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 RAB11FIP4Q86YS3 637 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 ZNF654Q8IZM8 581 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 ANKS1AQ92625 1134 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 TRIM34Q9BYJ4 488 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 NCOA5Q9HCD5 579 aaKnown RBP16.95■□□□□ 0.3
ARHGEF40-208ENST00000557498 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 TNNI2P48788 182 aa16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 NUCB2P80303 420 aa16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 DGKHQ86XP1 1220 aa16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 IL17RBQ9NRM6 502 aa16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 ZC3H4Q9UPT8 1303 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-208ENST00000557498 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 JAK2O60674 1132 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 DDAH1O94760 285 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 DDNO94850 711 aaPredicted RBP16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 AKR1B1P15121 316 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 TNFAIP1Q13829 316 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 RCSD1Q6JBY9 416 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 CATIPQ7Z7H3 387 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 TRPM4Q8TD43 1214 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 CCDC17Q96LX7 622 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 CSRNP1Q96S65 589 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 MYL10Q9BUA6 226 aa16.93■□□□□ 0.3
ARHGEF40-208ENST00000557498 IGKV6D-41A0A0C4DH26 115 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 CALM1P0DP23 149 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 CALM2P0DP24 149 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 CALM3P0DP25 149 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 RXRAP19793 462 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 LMOD1P29536 600 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 RTN1Q16799 776 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 TATDN1Q6P1N9 297 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 TMEM39BQ9GZU3 492 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 HERC5Q9UII4 1024 aaKnown RBP16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 HACL1Q9UJ83 578 aa16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 ASTN2O75129 1339 aaPredicted RBP16.92■□□□□ 0.3
ARHGEF40-208ENST00000557498 FAM196BA6NMK8 535 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 CPLX1O14810 134 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 DTNBO60941 627 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 SLURP2P0DP57 97 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 EPS15P42566 896 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 NOVP48745 357 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 CPLX2Q6PUV4 134 aaKnown RBP16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 NUP133Q8WUM0 1156 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 KAT14Q9H8E8 782 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 FAM217BQ9NTX9 383 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
ARHGEF40-208ENST00000557498 CDKL5O76039 1030 aa16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 CDC27P30260 824 aa16.9■□□□□ 0.3
ARHGEF40-208ENST00000557498 PKP1Q13835 747 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms