RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 ZFYP08048 801 aaPredicted RBP21.11■□□□□ 0.97
NEDD1-212ENST00000557478 CAPN2P17655 700 aa21.11■□□□□ 0.97
NEDD1-212ENST00000557478 HOXA7P31268 230 aaPredicted RBP21.11■□□□□ 0.97
NEDD1-212ENST00000557478 HMGCS2P54868 508 aa21.11■□□□□ 0.97
NEDD1-212ENST00000557478 FAM110CQ1W6H9 321 aa21.11■□□□□ 0.97
NEDD1-212ENST00000557478 CERKLQ49MI3 558 aaPredicted RBP21.11■□□□□ 0.97
NEDD1-212ENST00000557478 BCL11AQ9H165 835 aa21.11■□□□□ 0.97
NEDD1-212ENST00000557478 MCM9Q9NXL9 1143 aa21.11■□□□□ 0.97
NEDD1-212ENST00000557478 TTC41PQ6P2S7 1318 aa21.1■□□□□ 0.97
NEDD1-212ENST00000557478 SLURP2P0DP57 97 aa21.1■□□□□ 0.97
NEDD1-212ENST00000557478 RAET1EQ8TD07 263 aa21.1■□□□□ 0.97
NEDD1-212ENST00000557478 ZNF333Q96JL9 665 aa21.1■□□□□ 0.97
NEDD1-212ENST00000557478 TRIM47Q96LD4 638 aa21.1■□□□□ 0.97
NEDD1-212ENST00000557478 PTCH2Q9Y6C5 1203 aa21.1■□□□□ 0.97
NEDD1-212ENST00000557478 IRX3P78415 501 aaPredicted RBP21.09■□□□□ 0.97
NEDD1-212ENST00000557478 MTMR2Q13614 643 aa21.09■□□□□ 0.97
NEDD1-212ENST00000557478 ABCB5Q2M3G0 1257 aa21.09■□□□□ 0.97
NEDD1-212ENST00000557478 USP17L2Q6R6M4 530 aa21.09■□□□□ 0.97
NEDD1-212ENST00000557478 RRP1BQ14684 758 aaKnown RBP21.08■□□□□ 0.97
NEDD1-212ENST00000557478 COA7Q96BR5 231 aa21.08■□□□□ 0.97
NEDD1-212ENST00000557478 GCC1Q96CN9 775 aa21.08■□□□□ 0.97
NEDD1-212ENST00000557478 DCP1AQ9NPI6 582 aaPredicted RBP21.08■□□□□ 0.97
NEDD1-212ENST00000557478 FOCADQ5VW36 1801 aa21.08■□□□□ 0.96
NEDD1-212ENST00000557478 MYPNQ86TC9 1320 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 GDF11O95390 407 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 GH2P01242 217 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 TREML2Q5T2D2 321 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 GIMAP6Q6P9H5 292 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 KBTBD3Q8NAB2 608 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 SLAIN1Q8ND83 568 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 ARHGAP39Q9C0H5 1083 aa21.07■□□□□ 0.96
NEDD1-212ENST00000557478 ASCC2Q9H1I8 757 aaPredicted RBP21.07■□□□□ 0.96
NEDD1-212ENST00000557478 TNPO2O14787 897 aaKnown RBP21.06■□□□□ 0.96
NEDD1-212ENST00000557478 SMARCA5O60264 1052 aaPredicted RBP21.06■□□□□ 0.96
NEDD1-212ENST00000557478 GLRX3O76003 335 aaKnown RBP21.06■□□□□ 0.96
NEDD1-212ENST00000557478 GRK4P32298 578 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 UBXN2AP68543 259 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 GABPAQ06546 454 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 IRF5Q13568 498 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 CCDC84Q86UT8 332 aaPredicted RBP21.06■□□□□ 0.96
NEDD1-212ENST00000557478 LCORLQ8N3X6 602 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 NKX2-3Q8TAU0 364 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 C12orf42Q96LP6 360 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 CCDC17Q96LX7 622 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 FEZ1Q99689 392 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 KIAA1683Q9H0B3 1180 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.06■□□□□ 0.96
NEDD1-212ENST00000557478 PCDHB15Q9Y5E8 787 aa21.06■□□□□ 0.96
NEDD1-212ENST00000557478 MBD4O95243 580 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 GNAT2P19087 354 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 PLCD1P51178 756 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 CAP1Q01518 475 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 HDAC1Q13547 482 aaPredicted RBP21.05■□□□□ 0.96
NEDD1-212ENST00000557478 SLC4A8Q2Y0W8 1093 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 ANKRD13CQ8N6S4 541 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 PXYLP1Q8TE99 480 aa21.05■□□□□ 0.96
NEDD1-212ENST00000557478 EDC3Q96F86 508 aaKnown RBP21.05■□□□□ 0.96
NEDD1-212ENST00000557478 RAB3GAP1Q15042 981 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 TMEM179Q6ZVK1 233 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 TICAM2Q86XR7 235 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 SH2D4AQ9H788 454 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 ARMT1Q9H993 441 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 MORF4L1Q9UBU8 362 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 PHIPQ8WWQ0 1821 aa21.04■□□□□ 0.96
NEDD1-212ENST00000557478 SHMT1P34896 483 aa21.03■□□□□ 0.96
NEDD1-212ENST00000557478 SDR42E1Q8WUS8 393 aa21.03■□□□□ 0.96
NEDD1-212ENST00000557478 APPBP2Q92624 585 aa21.03■□□□□ 0.96
NEDD1-212ENST00000557478 YTHDC1Q96MU7 727 aaKnown RBP21.03■□□□□ 0.96
NEDD1-212ENST00000557478 ARPP21Q9UBL0 812 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-212ENST00000557478 CENPFP49454 3210 aa21.03■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L15C9J2P7 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L13C9JLJ4 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L11C9JVI0 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L18D6R9N7 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L22D6RA61 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L17D6RBQ6 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L19D6RCP7 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L20D6RJB6 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 USP17L24Q0WX57 530 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 GPRC5AQ8NFJ5 357 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 ZNF287Q9HBT7 754 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 SLC4A4Q9Y6R1 1079 aa21.02■□□□□ 0.96
NEDD1-212ENST00000557478 MYO5AQ9Y4I1 1855 aaKnown RBP21.02■□□□□ 0.96
NEDD1-212ENST00000557478 LOC285556D6RIA3 1793 aa21.01■□□□□ 0.95
NEDD1-212ENST00000557478 RNF113AO15541 343 aaKnown RBP21.01■□□□□ 0.95
NEDD1-212ENST00000557478 CTGFP29279 349 aa21.01■□□□□ 0.95
NEDD1-212ENST00000557478 HERVK_113P62684 666 aa21.01■□□□□ 0.95
NEDD1-212ENST00000557478 PRKCZQ05513 592 aa21.01■□□□□ 0.95
NEDD1-212ENST00000557478 C12orf60Q5U649 245 aa21.01■□□□□ 0.95
NEDD1-212ENST00000557478 BIN2Q9UBW5 565 aaPredicted RBP21.01■□□□□ 0.95
NEDD1-212ENST00000557478 CDK5RAP2Q96SN8 1893 aa21.01■□□□□ 0.95
NEDD1-212ENST00000557478 PTPRFP10586 1907 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 SIPA1L1O43166 1804 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 MX1P20591 662 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 MAPK4P31152 587 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 FLT3LGP49771 235 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 CCNA1P78396 465 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 JAG1P78504 1218 aa21■□□□□ 0.95
NEDD1-212ENST00000557478 CCAR1Q8IX12 1150 aaKnown RBP21■□□□□ 0.95
NEDD1-212ENST00000557478 SH3TC2Q8TF17 1288 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms