RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ZNFX1Q9P2E3 1918 aaKnown RBP17.31■□□□□ 0.36
SLIRP-210ENST00000557431 HMGCRP04035 888 aa17.3■□□□□ 0.36
SLIRP-210ENST00000557431 IRX3P78415 501 aaPredicted RBP17.3■□□□□ 0.36
SLIRP-210ENST00000557431 PI4KBQ9UBF8 816 aa17.3■□□□□ 0.36
SLIRP-210ENST00000557431 HERC5Q9UII4 1024 aaKnown RBP17.3■□□□□ 0.36
SLIRP-210ENST00000557431 SYN1P17600 705 aa17.29■□□□□ 0.36
SLIRP-210ENST00000557431 MNX1P50219 401 aaPredicted RBP17.29■□□□□ 0.36
SLIRP-210ENST00000557431 BACE1P56817 501 aa17.29■□□□□ 0.36
SLIRP-210ENST00000557431 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.363e-8■□□□□ 8.6
SLIRP-210ENST00000557431 POLA2Q14181 598 aa17.29■□□□□ 0.36
SLIRP-210ENST00000557431 CRACR2BQ8N4Y2 399 aaPredicted RBP17.29■□□□□ 0.36
SLIRP-210ENST00000557431 PAGR1Q9BTK6 254 aa17.29■□□□□ 0.36
SLIRP-210ENST00000557431 CCDC8Q9H0W5 538 aaPredicted RBP17.29■□□□□ 0.36
SLIRP-210ENST00000557431 ZBTB21Q9ULJ3 1066 aa17.29■□□□□ 0.36
SLIRP-210ENST00000557431 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
SLIRP-210ENST00000557431 MAP4K4O95819 1239 aaPredicted RBP17.28■□□□□ 0.36
SLIRP-210ENST00000557431 ZYXQ15942 572 aaKnown RBP17.28■□□□□ 0.36
SLIRP-210ENST00000557431 Q3C1V9 767 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 POTEEQ6S8J3 1075 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 MIGA1Q8NAN2 632 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 PORCNQ9H237 461 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 HMX1Q9NP08 348 aaPredicted RBP17.28■□□□□ 0.36
SLIRP-210ENST00000557431 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 MORF4L1Q9UBU8 362 aa17.28■□□□□ 0.36
SLIRP-210ENST00000557431 MYH7P12883 1935 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 RPTORQ8N122 1335 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 COL11A1P12107 1806 aaPredicted RBP17.27■□□□□ 0.36
SLIRP-210ENST00000557431 PARP14Q460N5 1801 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 SURF6O75683 361 aaKnown RBP17.27■□□□□ 0.36
SLIRP-210ENST00000557431 BAG3O95817 575 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 ASNSP08243 561 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 HERVK_113P62684 666 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 CCL14Q16627 93 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 WDR18Q9BV38 432 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
SLIRP-210ENST00000557431 DBNLQ9UJU6 430 aaKnown RBP17.27■□□□□ 0.36
SLIRP-210ENST00000557431 RLFQ13129 1914 aa17.26■□□□□ 0.35
SLIRP-210ENST00000557431 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
SLIRP-210ENST00000557431 PPP4CP60510 307 aa17.26■□□□□ 0.35
SLIRP-210ENST00000557431 DHX36Q9H2U1 1008 aaKnown RBP17.26■□□□□ 0.35
SLIRP-210ENST00000557431 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
SLIRP-210ENST00000557431 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
SLIRP-210ENST00000557431 LAMA3Q16787 3333 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 USP17L10C9JJH3 530 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 IDH1O75874 414 aaKnown RBP17.25■□□□□ 0.35
SLIRP-210ENST00000557431 RLBP1P12271 317 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 CYP7A1P22680 504 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
SLIRP-210ENST00000557431 ATP8B2P98198 1209 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 ZKSCAN2Q63HK3 967 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 SSH3Q8TE77 659 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 ANTXR1Q9H6X2 564 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 GPR108Q9NPR9 543 aa17.25■□□□□ 0.35
SLIRP-210ENST00000557431 PFASO15067 1338 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 CCER2I3L3R5 266 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 GH2P01242 217 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 PLCG2P16885 1265 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
SLIRP-210ENST00000557431 ERVK-9P63128 1117 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 ERVK-24P63145 666 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 EVX2Q03828 476 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
SLIRP-210ENST00000557431 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 C11orf49Q9H6J7 331 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 SMCHD1A6NHR9 2005 aa17.24■□□□□ 0.35
SLIRP-210ENST00000557431 CACNB2Q08289 660 aaPredicted RBP17.23■□□□□ 0.35
SLIRP-210ENST00000557431 GPR142Q7Z601 462 aa17.23■□□□□ 0.35
SLIRP-210ENST00000557431 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
SLIRP-210ENST00000557431 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
SLIRP-210ENST00000557431 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
SLIRP-210ENST00000557431 GPRC5AQ8NFJ5 357 aa17.23■□□□□ 0.35
SLIRP-210ENST00000557431 GDF15Q99988 308 aa17.23■□□□□ 0.35
SLIRP-210ENST00000557431 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
SLIRP-210ENST00000557431 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 C19orf81C9J6K1 198 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 CNMDO75829 334 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 MAP3K21Q5TCX8 1036 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 ANKLE1Q8NAG6 615 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 OGDHLQ9ULD0 1010 aa17.22■□□□□ 0.35
SLIRP-210ENST00000557431 A0A0G2JMZ2 1700 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 LTBP2Q14767 1821 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 ZKSCAN1P17029 563 aaPredicted RBP17.21■□□□□ 0.35
SLIRP-210ENST00000557431 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.35
SLIRP-210ENST00000557431 USP5P45974 858 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 WDR78Q5VTH9 848 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 USP17L2Q6R6M4 530 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 Q7L0L9 218 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 ACER1Q8TDN7 264 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 FEZ1Q99689 392 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 BCL11AQ9H165 835 aa17.21■□□□□ 0.35
SLIRP-210ENST00000557431 A0A1W2PPC1 479 aa17.2■□□□□ 0.34
SLIRP-210ENST00000557431 MORN1Q5T089 497 aa17.2■□□□□ 0.34
SLIRP-210ENST00000557431 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms