RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 METTL14Q9HCE5 456 aaKnown RBP7.79□□□□□ -1.16
FOXN3-215ENST00000557261 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
FOXN3-215ENST00000557261 DDX56Q9NY93 547 aaKnown RBP7.79□□□□□ -1.16
FOXN3-215ENST00000557261 ANKIB1Q9P2G1 1089 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 MSRB2Q9Y3D2 182 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 SUPT16HQ9Y5B9 1047 aaKnown RBP7.79□□□□□ -1.16
FOXN3-215ENST00000557261 ACEP12821 1306 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 SLIT3O75094 1523 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 CRYBG1Q9Y4K1 1723 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 A0A1W2PNR3 127 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 GPC1P35052 558 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 GYS2P54840 703 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 RASIP1Q5U651 963 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 TTC39BQ5VTQ0 682 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-215ENST00000557261 MRPL14Q6P1L8 145 aaKnown RBP7.78□□□□□ -1.16
FOXN3-215ENST00000557261 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
FOXN3-215ENST00000557261 SV2BQ7L1I2 683 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 ANKRD24Q8TF21 1146 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 NKD1Q969G9 470 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 CFAP53Q96M91 514 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 TNKS2Q9H2K2 1166 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 C19orf44Q9H6X5 657 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 C1orf167Q5SNV9 1468 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 LTN1O94822 1766 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 NHSL1Q5SYE7 1610 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 TTC21BQ7Z4L5 1316 aa7.78□□□□□ -1.16
FOXN3-215ENST00000557261 TMEM94Q12767 1356 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 MMP20O60882 483 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 TARSP26639 723 aaKnown RBP7.77□□□□□ -1.17
FOXN3-215ENST00000557261 GRIA4P48058 902 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 HNRNPUQ00839 825 aaKnown RBP eCLIP7.77□□□□□ -1.17
FOXN3-215ENST00000557261 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 ZKSCAN3Q9BRR0 538 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 IRF2BPLQ9H1B7 796 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 GPAMQ9HCL2 828 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 CHPF2Q9P2E5 772 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 NXF1Q9UBU9 619 aaKnown RBP7.77□□□□□ -1.17
FOXN3-215ENST00000557261 PCDHB5Q9Y5E4 795 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 PEAK1Q9H792 1746 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 NFAT5O94916 1531 aa7.77□□□□□ -1.17
FOXN3-215ENST00000557261 RTL1A6NKG5 1358 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 MSH6P52701 1360 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 ENC1O14682 589 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 MAP4K4O95819 1239 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-215ENST00000557261 F13A1P00488 732 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 EGFRP00533 1210 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-215ENST00000557261 LMNB2Q03252 620 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 SCARF1Q14162 830 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 WDR43Q15061 677 aaKnown RBP eCLIP7.76□□□□□ -1.17
FOXN3-215ENST00000557261 C21orf62-AS1Q17RA5 79 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 FAM9BQ8IZU0 186 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 FAM126AQ9BYI3 521 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-215ENST00000557261 ZFATQ9P243 1243 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 R3HCC1Q9Y3T6 440 aaKnown RBP7.76□□□□□ -1.17
FOXN3-215ENST00000557261 FAM208AQ9UK61 1670 aaKnown RBP7.76□□□□□ -1.17
FOXN3-215ENST00000557261 CAMTA1Q9Y6Y1 1673 aa7.76□□□□□ -1.17
FOXN3-215ENST00000557261 SPINT1O43278 529 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 DIAPH1O60610 1272 aaKnown RBP7.75□□□□□ -1.17
FOXN3-215ENST00000557261 TRIM37O94972 964 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 EVA1CP58658 441 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 FAAP100Q0VG06 881 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 DDR2Q16832 855 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 FBXW10Q5XX13 1052 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 FAM196AQ6ZSG2 479 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 KIAA0907Q7Z7F0 614 aaPredicted RBP7.75□□□□□ -1.17
FOXN3-215ENST00000557261 SLC16A10Q8TF71 515 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 APPBP2Q92624 585 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 COG3Q96JB2 828 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 RUBCNLQ9H714 662 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 DZANK1Q9NVP4 752 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 PPP4R2Q9NY27 417 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 PPM1HQ9ULR3 514 aa7.75□□□□□ -1.17
FOXN3-215ENST00000557261 GPC6Q9Y625 555 aaPredicted RBP7.75□□□□□ -1.17
FOXN3-215ENST00000557261 SBNO1A3KN83 1393 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 B2RBV5 119 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 EDN3P14138 238 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 MASP1P48740 699 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 MTHFSP49914 203 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 ZNF157P51786 506 aaPredicted RBP7.74□□□□□ -1.17
FOXN3-215ENST00000557261 SFSWAPQ12872 951 aaKnown RBP7.74□□□□□ -1.17
FOXN3-215ENST00000557261 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 CCNJLQ8IV13 435 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 TRPM4Q8TD43 1214 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 CCDC113Q9H0I3 377 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 BRD7Q9NPI1 651 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 ABCA3Q99758 1704 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 PXDNQ92626 1479 aa7.74□□□□□ -1.17
FOXN3-215ENST00000557261 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 SOBPA7XYQ1 873 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 PPP1R12AO14974 1030 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-215ENST00000557261 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-215ENST00000557261 MCM4P33991 863 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 GIPRP48546 466 aa7.73□□□□□ -1.17
FOXN3-215ENST00000557261 EIF6P56537 245 aaKnown RBP7.73□□□□□ -1.17
FOXN3-215ENST00000557261 COL9A2Q14055 689 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-215ENST00000557261 AGMOQ6ZNB7 445 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms