RNA–Protein interactions for RNA: ENST00000557245.1

RBM23-228, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 387 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-228	ENST00000557245	TFRC	P02786	760 aa	Known RBP	13.7	□□□□□ -0.22
RBM23-228	ENST00000557245	DIS3L	Q8TF46	1054 aa	Known RBP	13.7	□□□□□ -0.22
RBM23-228	ENST00000557245	DNAJC18	Q9H819	358 aa		13.7	□□□□□ -0.22
RBM23-228	ENST00000557245	AS3MT	Q9HBK9	375 aa		13.7	□□□□□ -0.22
RBM23-228	ENST00000557245	LRP2BP	Q9P2M1	347 aa		13.7	□□□□□ -0.22
RBM23-228	ENST00000557245	ANKLE1	Q8NAG6	615 aa		13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	EXOC6	Q8TAG9	804 aa		13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	PAWR	Q96IZ0	340 aa	Known RBP	13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	NOL10	Q9BSC4	688 aa	Known RBP	13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	WDR18	Q9BV38	432 aa		13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	DHX36	Q9H2U1	1008 aa	Known RBP	13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	IL1RAPL2	Q9NP60	686 aa		13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	PI4KB	Q9UBF8	816 aa		13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	GJD2	Q9UKL4	321 aa		13.69	□□□□□ -0.22
RBM23-228	ENST00000557245	MYH8	P13535	1937 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	FLT1	P17948	1338 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	ASNS	P08243	561 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	PLCG2	P16885	1265 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	MTMR2	Q13614	643 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	TNNI3K	Q59H18	835 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	NAA16	Q6N069	864 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	ADGRA1	Q86SQ6	560 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	METTL16	Q86W50	562 aa	Known RBP	13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	TRIB2	Q92519	343 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	GPR108	Q9NPR9	543 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	NOP58	Q9Y2X3	529 aa	Known RBP	13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	PCDHB15	Q9Y5E8	787 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	FPGT-TNNI3K	V9GXZ4	949 aa		13.68	□□□□□ -0.22
RBM23-228	ENST00000557245	BAG3	O95817	575 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	HOXA7	P31268	230 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	MNX1	P50219	401 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	BACE1	P56817	501 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	PPP4C	P60510	307 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	IRX3	P78415	501 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	JAG1	P78504	1218 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	TRIM32	Q13049	653 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	HSP90AB4P	Q58FF6	505 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	MAP3K21	Q5TCX8	1036 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	NECAB2	Q7Z6G3	386 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	ERC1	Q8IUD2	1116 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	MAPKAPK5	Q8IW41	473 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	DBNDD2	Q9BQY9	259 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	SNRK	Q9NRH2	765 aa		13.67	□□□□□ -0.22
RBM23-228	ENST00000557245	RPTOR	Q8N122	1335 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	SOX1	O00570	391 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	IGSF3	O75054	1194 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	HERVK_113	P62684	666 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	TTC39A	Q5SRH9	613 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	AACS	Q86V21	672 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	RHPN1	Q8TCX5	695 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	TGFBRAP1	Q8WUH2	860 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	SOCS4	Q8WXH5	440 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	TXNRD2	Q9NNW7	524 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	HMX1	Q9NP08	348 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	GINM1	Q9NU53	330 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	TLR7	Q9NYK1	1049 aa	Known RBP	13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	TMOD4	Q9NZQ9	345 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	ZBTB21	Q9ULJ3	1066 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245		A0A0G2JMZ2	1700 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	ZNF236	Q9UL36	1845 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	COL6A3	P12111	3177 aa		13.66	□□□□□ -0.22
RBM23-228	ENST00000557245	C19orf81	C9J6K1	198 aa		13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	SMARCA5	O60264	1052 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	CYP2E1	P05181	493 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	C7orf61	Q8IZ16	206 aa		13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	KIF1BP	Q96EK5	621 aa		13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	GDF15	Q99988	308 aa		13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	STAP2	Q9UGK3	403 aa		13.65	□□□□□ -0.22
RBM23-228	ENST00000557245	PARP14	Q460N5	1801 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	PEX10	O60683	326 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	GDF11	O95390	407 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	XRCC5	P13010	732 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	ZAP70	P43403	619 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	CCDC158	Q5M9N0	1113 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	EAF2	Q96CJ1	260 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	P2RX7	Q99572	595 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	NBPF3	Q9H094	633 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	PIH1D3	Q9NQM4	214 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	OGDHL	Q9ULD0	1010 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	PALD1	Q9ULE6	856 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	RLF	Q13129	1914 aa		13.64	□□□□□ -0.23
RBM23-228	ENST00000557245	LTBP2	Q14767	1821 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	USP17L10	C9JJH3	530 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	RAB11FIP3	O75154	756 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	IFIT2	P09913	472 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	PRKAR2A	P13861	404 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	CYP2B6	P20813	491 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	MAPK4	P31152	587 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	BMP8B	P34820	402 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	ERVK-9	P63128	1117 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	ERVK-24	P63145	666 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	CLASRP	Q8N2M8	674 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	GPRC5A	Q8NFJ5	357 aa		13.63	□□□□□ -0.23
RBM23-228	ENST00000557245	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms