RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 FMNL1O95466 1100 aaPredicted RBP27.44■■□□□ 1.98
TMEM260-214ENST00000556975 OSBPP22059 807 aa27.44■■□□□ 1.98
TMEM260-214ENST00000556975 PABPC4Q13310 644 aaKnown RBP eCLIP27.44■■□□□ 1.98
TMEM260-214ENST00000556975 ZBTB21Q9ULJ3 1066 aa27.44■■□□□ 1.98
TMEM260-214ENST00000556975 C19orf81C9J6K1 198 aa27.43■■□□□ 1.98
TMEM260-214ENST00000556975 GDF11O95390 407 aa27.43■■□□□ 1.98
TMEM260-214ENST00000556975 ADD2P35612 726 aa27.43■■□□□ 1.98
TMEM260-214ENST00000556975 RRP1P56182 461 aaKnown RBP27.43■■□□□ 1.98
TMEM260-214ENST00000556975 SLC4A8Q2Y0W8 1093 aa27.43■■□□□ 1.98
TMEM260-214ENST00000556975 PRPF38BQ5VTL8 546 aaKnown RBP27.43■■□□□ 1.98
TMEM260-214ENST00000556975 SMCR8Q8TEV9 937 aaPredicted RBP27.43■■□□□ 1.98
TMEM260-214ENST00000556975 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.43■■□□□ 1.98
TMEM260-214ENST00000556975 PLCD1P51178 756 aa27.42■■□□□ 1.98
TMEM260-214ENST00000556975 FCGRTP55899 365 aa27.42■■□□□ 1.98
TMEM260-214ENST00000556975 SHROOM1Q2M3G4 852 aaPredicted RBP27.42■■□□□ 1.98
TMEM260-214ENST00000556975 ECHDC1Q9NTX5 307 aa27.42■■□□□ 1.98
TMEM260-214ENST00000556975 PCDHB15Q9Y5E8 787 aa27.42■■□□□ 1.98
TMEM260-214ENST00000556975 RBBP6Q7Z6E9 1792 aaKnown RBP27.42■■□□□ 1.98
TMEM260-214ENST00000556975 POTEFA5A3E0 1075 aa27.41■■□□□ 1.98
TMEM260-214ENST00000556975 USP17L10C9JJH3 530 aa27.41■■□□□ 1.98
TMEM260-214ENST00000556975 MTMR2Q13614 643 aa27.41■■□□□ 1.98
TMEM260-214ENST00000556975 ECM2O94769 699 aaPredicted RBP27.4■■□□□ 1.98
TMEM260-214ENST00000556975 GCLCP48506 637 aaPredicted RBP27.4■■□□□ 1.98
TMEM260-214ENST00000556975 GABPAQ06546 454 aa27.4■■□□□ 1.98
TMEM260-214ENST00000556975 UBE3CQ15386 1083 aa27.4■■□□□ 1.98
TMEM260-214ENST00000556975 LCORLQ8N3X6 602 aa27.4■■□□□ 1.98
TMEM260-214ENST00000556975 DDX60LQ5H9U9 1706 aaKnown RBP27.4■■□□□ 1.98
TMEM260-214ENST00000556975 MGAMO43451 1857 aa27.4■■□□□ 1.98
TMEM260-214ENST00000556975 GH2P01242 217 aa27.39■■□□□ 1.98
TMEM260-214ENST00000556975 POLR3DP05423 398 aaPredicted RBP27.39■■□□□ 1.98
TMEM260-214ENST00000556975 HOXA7P31268 230 aaPredicted RBP27.39■■□□□ 1.98
TMEM260-214ENST00000556975 FAM110CQ1W6H9 321 aa27.39■■□□□ 1.98
TMEM260-214ENST00000556975 TMEM106CQ9BVX2 250 aa27.39■■□□□ 1.98
TMEM260-214ENST00000556975 DCP1AQ9NPI6 582 aaPredicted RBP27.39■■□□□ 1.98
TMEM260-214ENST00000556975 MCM9Q9NXL9 1143 aa27.39■■□□□ 1.98
TMEM260-214ENST00000556975 TMOD4Q9NZQ9 345 aa27.39■■□□□ 1.98
TMEM260-214ENST00000556975 MYPNQ86TC9 1320 aa27.39■■□□□ 1.97
TMEM260-214ENST00000556975 CERKLQ49MI3 558 aaPredicted RBP27.38■■□□□ 1.97
TMEM260-214ENST00000556975 ZSCAN25Q6NSZ9 544 aa27.38■■□□□ 1.97
TMEM260-214ENST00000556975 ANKRD13CQ8N6S4 541 aa27.38■■□□□ 1.97
TMEM260-214ENST00000556975 SH3TC2Q8TF17 1288 aa27.38■■□□□ 1.97
TMEM260-214ENST00000556975 SDR42E1Q8WUS8 393 aa27.38■■□□□ 1.97
TMEM260-214ENST00000556975 ASCC2Q9H1I8 757 aaPredicted RBP27.38■■□□□ 1.97
TMEM260-214ENST00000556975 TAOK2Q9UL54 1235 aa27.38■■□□□ 1.97
TMEM260-214ENST00000556975 SHMT1P34896 483 aa27.37■■□□□ 1.97
TMEM260-214ENST00000556975 SLFNL1Q499Z3 407 aa27.37■■□□□ 1.97
TMEM260-214ENST00000556975 NAV1Q8NEY1 1877 aa27.37■■□□□ 1.97
TMEM260-214ENST00000556975 RAET1EQ8TD07 263 aa27.37■■□□□ 1.97
TMEM260-214ENST00000556975 ARMT1Q9H993 441 aa27.37■■□□□ 1.97
TMEM260-214ENST00000556975 ATP8A2Q9NTI2 1148 aa27.37■■□□□ 1.97
TMEM260-214ENST00000556975 PRKCZQ05513 592 aa27.36■■□□□ 1.97
TMEM260-214ENST00000556975 MYH7P12883 1935 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 BRCA2P51587 3418 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 MBD4O95243 580 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 GRK4P32298 578 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 ABCB5Q2M3G0 1257 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 GPATCH3Q96I76 525 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 EMILIN3Q9NT22 766 aa27.35■■□□□ 1.97
TMEM260-214ENST00000556975 CHGBP05060 677 aa27.34■■□□□ 1.97
TMEM260-214ENST00000556975 USP17L2Q6R6M4 530 aa27.34■■□□□ 1.97
TMEM260-214ENST00000556975 C12orf42Q96LP6 360 aa27.34■■□□□ 1.97
TMEM260-214ENST00000556975 CABP5Q9NP86 173 aa27.34■■□□□ 1.97
TMEM260-214ENST00000556975 GABRQQ9UN88 632 aa27.34■■□□□ 1.97
TMEM260-214ENST00000556975 TNPO2O14787 897 aaKnown RBP27.33■■□□□ 1.97
TMEM260-214ENST00000556975 PRKAB2O43741 272 aa27.33■■□□□ 1.97
TMEM260-214ENST00000556975 EN2P19622 333 aaPredicted RBP27.33■■□□□ 1.97
TMEM260-214ENST00000556975 IRX3P78415 501 aaPredicted RBP27.33■■□□□ 1.97
TMEM260-214ENST00000556975 MORF4L1Q9UBU8 362 aa27.33■■□□□ 1.97
TMEM260-214ENST00000556975 EVX2Q03828 476 aa27.32■■□□□ 1.96
TMEM260-214ENST00000556975 IRF5Q13568 498 aa27.32■■□□□ 1.96
TMEM260-214ENST00000556975 RAB3GAP1Q15042 981 aa27.32■■□□□ 1.96
TMEM260-214ENST00000556975 KBTBD3Q8NAB2 608 aa27.32■■□□□ 1.96
TMEM260-214ENST00000556975 P2RX7Q99572 595 aaKnown RBP27.32■■□□□ 1.96
TMEM260-214ENST00000556975 MKI67P46013 3256 aaKnown RBP27.31■■□□□ 1.96
TMEM260-214ENST00000556975 GUCY1A2P33402 732 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 FLT3LGP49771 235 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 SLAIN1Q8ND83 568 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 COA7Q96BR5 231 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 CRBNQ96SW2 442 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 KIAA1683Q9H0B3 1180 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 PUS7LQ9H0K6 701 aaKnown RBP27.31■■□□□ 1.96
TMEM260-214ENST00000556975 SWAP70Q9UH65 585 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 CEP290O15078 2479 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 DOCK3Q8IZD9 2030 aa27.31■■□□□ 1.96
TMEM260-214ENST00000556975 USP14P54578 494 aa27.3■■□□□ 1.96
TMEM260-214ENST00000556975 PXYLP1Q8TE99 480 aa27.3■■□□□ 1.96
TMEM260-214ENST00000556975 YTHDC1Q96MU7 727 aaKnown RBP27.3■■□□□ 1.96
TMEM260-214ENST00000556975 TTC41PQ6P2S7 1318 aa27.3■■□□□ 1.96
TMEM260-214ENST00000556975 CYP2D6P10635 497 aa27.29■■□□□ 1.96
TMEM260-214ENST00000556975 HERVK_113P62684 666 aa27.29■■□□□ 1.96
TMEM260-214ENST00000556975 C12orf60Q5U649 245 aa27.29■■□□□ 1.96
TMEM260-214ENST00000556975 MTFR1Q15390 333 aa27.28■■□□□ 1.96
TMEM260-214ENST00000556975 TSHZ3Q63HK5 1081 aa27.28■■□□□ 1.96
TMEM260-214ENST00000556975 ACER1Q8TDN7 264 aa27.28■■□□□ 1.96
TMEM260-214ENST00000556975 GTF3C2Q8WUA4 911 aaPredicted RBP27.28■■□□□ 1.96
TMEM260-214ENST00000556975 FEZ1Q99689 392 aa27.28■■□□□ 1.96
TMEM260-214ENST00000556975 SLC4A4Q9Y6R1 1079 aa27.28■■□□□ 1.96
TMEM260-214ENST00000556975 ADCY3O60266 1144 aa27.27■■□□□ 1.96
TMEM260-214ENST00000556975 MYCP01106 439 aaPredicted RBP27.27■■□□□ 1.96
TMEM260-214ENST00000556975 UBXN2AP68543 259 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms