RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PRDM5Q9NQX1 630 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-245ENST00000556958 PICK1Q9NRD5 415 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 STK17AQ9UEE5 414 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 ATP11BQ9Y2G3 1177 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 ZHX2Q9Y6X8 837 aa7.39□□□□□ -1.23
ATXN3-245ENST00000556958 TAF1P21675 1872 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 HOXB7P09629 217 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 CYP2B6P20813 491 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 CHRNDQ07001 517 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 CACNB2Q08289 660 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 PABPC4Q13310 644 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 CNGB1Q14028 1251 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 SOCS4Q8WXH5 440 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 JARID2Q92833 1246 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 EMID1Q96A84 441 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-245ENST00000556958 MYD88Q99836 296 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 MRIQ9BWK5 157 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 PRDM12Q9H4Q4 367 aa7.38□□□□□ -1.23
ATXN3-245ENST00000556958 COL3A1P02461 1466 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-245ENST00000556958 PI4K2BG5E9Z4 385 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 DNM1LO00429 736 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 SKIV2LQ15477 1246 aaKnown RBP7.37□□□□□ -1.23
ATXN3-245ENST00000556958 CSPP1Q1MSJ5 1256 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 CCDC129Q6ZRS4 1044 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 ARRDC4Q8NCT1 418 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 HERVK_113Q902F9 699 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 TEKT1Q969V4 418 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 AGTPBP1Q9UPW5 1226 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 JAG2Q9Y219 1238 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 TACC3Q9Y6A5 838 aa7.37□□□□□ -1.23
ATXN3-245ENST00000556958 MYBBP1AQ9BQG0 1328 aaKnown RBP7.36□□□□□ -1.23
ATXN3-245ENST00000556958 FAM86C2PA6NEL3 165 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 ERC2O15083 957 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 DDX58O95786 925 aaKnown RBP7.36□□□□□ -1.23
ATXN3-245ENST00000556958 ITGA6P23229 1130 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 MLLT3P42568 568 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-245ENST00000556958 CACNB3P54284 484 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 CCDC174Q6PII3 467 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 SLC39A5Q6ZMH5 540 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 CCAR1Q8IX12 1150 aaKnown RBP7.36□□□□□ -1.23
ATXN3-245ENST00000556958 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
ATXN3-245ENST00000556958 FAM151AQ8WW52 585 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 LPAR1Q92633 364 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 EPAS1Q99814 870 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 C11orf16Q9NQ32 467 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 COG5Q9UP83 839 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 AFG3L2Q9Y4W6 797 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 LAMB4A4D0S4 1761 aa7.36□□□□□ -1.23
ATXN3-245ENST00000556958 RPAP1Q9BWH6 1393 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-245ENST00000556958 MAPK8IP3Q9UPT6 1336 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 PTPRAP18433 802 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-245ENST00000556958 GGCXP38435 758 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 RGS2P41220 211 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 KCNQ1P51787 676 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 PRR20EP86478 221 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 PRR20CP86479 221 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 PRR20DP86480 221 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 PRR20BP86481 221 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 PRR20AP86496 221 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 TFF2Q03403 129 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 FPGSQ05932 587 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 LMOD3Q0VAK6 560 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 ADGRE1Q14246 886 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 MFSD14CQ5VZR4 134 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 SCYL3Q8IZE3 742 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 TBC1D22AQ8WUA7 517 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 ZDHHC15Q96MV8 337 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 METTL22Q9BUU2 404 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-245ENST00000556958 TMUB1Q9BVT8 246 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 MSRAQ9UJ68 235 aa7.35□□□□□ -1.23
ATXN3-245ENST00000556958 TRIM43BA6NCK2 446 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 KBTBD13C9JR72 458 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 SNAP23O00161 211 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 TAF5LO75529 589 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 ALADP13716 330 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 RAG1P15918 1043 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 CNGA1P29973 690 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 MAPK4P31152 587 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 HIBADHP31937 336 aaKnown RBP7.34□□□□□ -1.23
ATXN3-245ENST00000556958 RAB30Q15771 203 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 C1orf53Q5VUE5 145 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 PACS2Q86VP3 889 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 PROCA1Q8NCQ7 364 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-245ENST00000556958 TRIM43Q96BQ3 446 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-245ENST00000556958 CHMP4AQ9BY43 222 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 SLC28A3Q9HAS3 691 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 PDLIM7Q9NR12 457 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
ATXN3-245ENST00000556958 COL4A1P02462 1669 aa7.34□□□□□ -1.23
ATXN3-245ENST00000556958 LAMB1P07942 1786 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 ANKRD18BA2A2Z9 1011 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 GRXCR2A6NFK2 248 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 TRIM75PA6NK02 468 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 SMAPO00193 183 aa7.33□□□□□ -1.24
ATXN3-245ENST00000556958 CHL1O00533 1208 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms