RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 FKBP1CQ5VVH2 108 aa27.92■■■□□ 2.06
SIX4-203ENST00000556952 NKX2-3Q8TAU0 364 aa27.92■■■□□ 2.06
SIX4-203ENST00000556952 SH2B2O14492 632 aaPredicted RBP27.91■■■□□ 2.06
SIX4-203ENST00000556952 HSPA6P17066 643 aa27.91■■■□□ 2.06
SIX4-203ENST00000556952 EVCP57679 992 aa27.91■■■□□ 2.06
SIX4-203ENST00000556952 ME3Q16798 604 aa27.91■■■□□ 2.06
SIX4-203ENST00000556952 SULF1Q8IWU6 871 aa27.91■■■□□ 2.06
SIX4-203ENST00000556952 LARP6Q9BRS8 491 aaKnown RBP27.91■■■□□ 2.06
SIX4-203ENST00000556952 ZNF70Q9UC06 446 aaPredicted RBP27.91■■■□□ 2.06
SIX4-203ENST00000556952 ATRNL1Q5VV63 1379 aa27.91■■■□□ 2.06
SIX4-203ENST00000556952 RANBP6O60518 1105 aaKnown RBP27.9■■■□□ 2.06
SIX4-203ENST00000556952 CACNB3P54284 484 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 EHD4Q9H223 541 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 PRDM1O75626 825 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 LARGE1O95461 756 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 SPRYD3Q8NCJ5 442 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 IGDCC4Q8TDY8 1250 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 DYNLL2Q96FJ2 89 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 MKNK2Q9HBH9 465 aa27.9■■■□□ 2.06
SIX4-203ENST00000556952 ERICH2A1L162 156 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 LIFRP42702 1097 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 TMEM67Q5HYA8 995 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 IQCA1Q86XH1 822 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 ZNF274Q96GC6 653 aaPredicted RBP27.89■■■□□ 2.05
SIX4-203ENST00000556952 UBAC1Q9BSL1 405 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 VEZTQ9HBM0 779 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 SWAP70Q9UH65 585 aa27.89■■■□□ 2.05
SIX4-203ENST00000556952 CEP350Q5VT06 3117 aa27.88■■■□□ 2.05
SIX4-203ENST00000556952 IFIT3O14879 490 aaKnown RBP27.88■■■□□ 2.05
SIX4-203ENST00000556952 APLP1P51693 650 aa27.88■■■□□ 2.05
SIX4-203ENST00000556952 GABPAQ06546 454 aa27.88■■■□□ 2.05
SIX4-203ENST00000556952 APOBRQ0VD83 1088 aa27.88■■■□□ 2.05
SIX4-203ENST00000556952 APOBEC3FQ8IUX4 373 aaKnown RBP27.88■■■□□ 2.05
SIX4-203ENST00000556952 SERPINB13Q9UIV8 391 aa27.88■■■□□ 2.05
SIX4-203ENST00000556952 CDK8P49336 464 aa27.87■■■□□ 2.05
SIX4-203ENST00000556952 HTRA3P83110 453 aa27.87■■■□□ 2.05
SIX4-203ENST00000556952 TCP10Q12799 353 aa27.87■■■□□ 2.05
SIX4-203ENST00000556952 SGMS1Q86VZ5 419 aa27.87■■■□□ 2.05
SIX4-203ENST00000556952 LY9Q9HBG7 655 aa27.87■■■□□ 2.05
SIX4-203ENST00000556952 TSPY2A6NKD2 308 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 PRAMEF18Q5VWM3 479 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 TMTC2Q8N394 836 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 SLKQ9H2G2 1235 aaPredicted RBP27.86■■■□□ 2.05
SIX4-203ENST00000556952 CWC22Q9HCG8 908 aaKnown RBP27.86■■■□□ 2.05
SIX4-203ENST00000556952 GPHNQ9NQX3 736 aaPredicted RBP27.86■■■□□ 2.05
SIX4-203ENST00000556952 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.86■■■□□ 2.05
SIX4-203ENST00000556952 FAM83AQ86UY5 434 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 ZFPM1Q8IX07 1006 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 ZNF444Q8N0Y2 327 aaPredicted RBP27.86■■■□□ 2.05
SIX4-203ENST00000556952 CDCA5Q96FF9 252 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 ZSCAN10Q96SZ4 725 aaPredicted RBP27.86■■■□□ 2.05
SIX4-203ENST00000556952 PI4KBQ9UBF8 816 aa27.86■■■□□ 2.05
SIX4-203ENST00000556952 TNKSO95271 1327 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 PFKFB2O60825 505 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 RASA1P20936 1047 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 WTAPQ15007 396 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 CST9Q5W186 159 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 ZSCAN29Q8IWY8 852 aaPredicted RBP27.85■■■□□ 2.05
SIX4-203ENST00000556952 SLC44A5Q8NCS7 719 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 FAM151AQ8WW52 585 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 GTF3C6Q969F1 213 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 CHMP4CQ96CF2 233 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 ZNF408Q9H9D4 720 aa27.85■■■□□ 2.05
SIX4-203ENST00000556952 KLF18A0A0U1RQI7 1052 aa27.84■■■□□ 2.05
SIX4-203ENST00000556952 CCDC178Q5BJE1 867 aa27.84■■■□□ 2.05
SIX4-203ENST00000556952 CCDC83Q8IWF9 413 aa27.84■■■□□ 2.05
SIX4-203ENST00000556952 ZKSCAN3Q9BRR0 538 aa27.84■■■□□ 2.05
SIX4-203ENST00000556952 FOXD4L1Q9NU39 408 aa27.84■■■□□ 2.05
SIX4-203ENST00000556952 CNTNAP1P78357 1384 aa27.83■■■□□ 2.05
SIX4-203ENST00000556952 DDTLA6NHG4 134 aaPredicted RBP27.83■■■□□ 2.05
SIX4-203ENST00000556952 TCP10L2B9ZVM9 353 aa27.83■■■□□ 2.05
SIX4-203ENST00000556952 CELF2O95319 508 aaKnown RBP27.83■■■□□ 2.05
SIX4-203ENST00000556952 PDIA3P30101 505 aaKnown RBP27.83■■■□□ 2.05
SIX4-203ENST00000556952 SEC23AQ15436 765 aa27.83■■■□□ 2.05
SIX4-203ENST00000556952 SH3BP5LQ7L8J4 393 aa27.83■■■□□ 2.05
SIX4-203ENST00000556952 DEFB129Q9H1M3 183 aa27.83■■■□□ 2.05
SIX4-203ENST00000556952 TSPY3P0CV98 308 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 TSPY8P0CW00 308 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 DDIT3P35638 169 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 TFAP4Q01664 338 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 ST3GAL1Q11201 340 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 FAM47AQ5JRC9 791 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 TCP11L1Q9NUJ3 509 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 BRPF3Q9ULD4 1205 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 PLIN4Q96Q06 1357 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 CCDC69A6NI79 296 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 TNNI2P48788 182 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 STK3Q13188 491 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 TNFAIP1Q13829 316 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 NFXL1Q6ZNB6 911 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 METTL16Q86W50 562 aaKnown RBP27.82■■■□□ 2.04
SIX4-203ENST00000556952 FOXP4Q8IVH2 680 aaPredicted RBP27.82■■■□□ 2.04
SIX4-203ENST00000556952 ENAHQ8N8S7 591 aaPredicted RBP27.82■■■□□ 2.04
SIX4-203ENST00000556952 NECAB1Q8N987 351 aa27.82■■■□□ 2.04
SIX4-203ENST00000556952 CIZ1Q9ULV3 898 aaPredicted RBP27.82■■■□□ 2.04
SIX4-203ENST00000556952 GREB1LQ9C091 1923 aaPredicted RBP27.81■■■□□ 2.04
SIX4-203ENST00000556952 TMEM88BA6NKF7 163 aa27.81■■■□□ 2.04
SIX4-203ENST00000556952 GOLGA8BA8MQT2 603 aa27.81■■■□□ 2.04
SIX4-203ENST00000556952 APOA5Q6Q788 366 aa27.81■■■□□ 2.04
SIX4-203ENST00000556952 CRACR2BQ8N4Y2 399 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms