RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TTC6Q86TZ1 520 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 FOXP4Q8IVH2 680 aaPredicted RBP12.5□□□□□ -0.41
SNX6-208ENST00000556712 SLC44A5Q8NCS7 719 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 APPBP2Q92624 585 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 OSBP2Q969R2 916 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 FSD1Q9BTV5 496 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 EHD4Q9H223 541 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
SNX6-208ENST00000556712 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 USP17L5A8MUK1 530 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 GH2P01242 217 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 CYP2C8P10632 490 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 HMGCS2P54868 508 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 SPP2Q13103 211 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 MTMR2Q13614 643 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 TREML2Q5T2D2 321 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 SEC62Q99442 399 aaKnown RBP12.49□□□□□ -0.41
SNX6-208ENST00000556712 STAP2Q9UGK3 403 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 CPA4Q9UI42 421 aa12.49□□□□□ -0.41
SNX6-208ENST00000556712 MGAMO43451 1857 aa12.48□□□□□ -0.41
SNX6-208ENST00000556712 TLR2O60603 784 aa12.48□□□□□ -0.41
SNX6-208ENST00000556712 ASNSP08243 561 aa12.48□□□□□ -0.41
SNX6-208ENST00000556712 SP3Q02447 781 aa12.48□□□□□ -0.41
SNX6-208ENST00000556712 GABPAQ06546 454 aa12.48□□□□□ -0.41
SNX6-208ENST00000556712 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
SNX6-208ENST00000556712 STRBPQ96SI9 672 aaKnown RBP12.48□□□□□ -0.41
SNX6-208ENST00000556712 EPB41L4AQ9HCS5 686 aaPredicted RBP12.48□□□□□ -0.41
SNX6-208ENST00000556712 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
SNX6-208ENST00000556712 GPAA1O43292 621 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 ZFYP08048 801 aaPredicted RBP12.47□□□□□ -0.41
SNX6-208ENST00000556712 NUCB1Q02818 461 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
SNX6-208ENST00000556712 FASTKD5Q7L8L6 764 aaKnown RBP12.47□□□□□ -0.41
SNX6-208ENST00000556712 OTOP1Q7RTM1 612 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 PARK7Q99497 189 aaKnown RBP12.47□□□□□ -0.41
SNX6-208ENST00000556712 ARHGAP39Q9C0H5 1083 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 ATP8A2Q9NTI2 1148 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 AGTPBP1Q9UPW5 1226 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 TRIM17Q9Y577 477 aa12.47□□□□□ -0.41
SNX6-208ENST00000556712 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 USP17L21D6R901 530 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
SNX6-208ENST00000556712 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 ZMYM1Q5SVZ6 1142 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 CTR9Q6PD62 1173 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 CCDC129Q6ZRS4 1044 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 STK11IPQ8N1F8 1099 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
SNX6-208ENST00000556712 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.42
SNX6-208ENST00000556712 MPHOSPH10O00566 681 aaKnown RBP12.45□□□□□ -0.42
SNX6-208ENST00000556712 AKR1B1P15121 316 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 CTGFP29279 349 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 GUCY1A2P33402 732 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 SEPT2Q15019 361 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 C12orf60Q5U649 245 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
SNX6-208ENST00000556712 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 WDR18Q9BV38 432 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
SNX6-208ENST00000556712 TRIM6-TRIM34B2RNG4 842 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 PDE4AP27815 886 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 TDO2P48775 406 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 BACE1P56817 501 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 LACTBP83111 547 aaPredicted RBP12.44□□□□□ -0.42
SNX6-208ENST00000556712 LRRFIP1Q32MZ4 808 aaKnown RBP12.44□□□□□ -0.42
SNX6-208ENST00000556712 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 AMOTL1Q8IY63 956 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 RILPL2Q969X0 211 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 FEZ1Q99689 392 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 EFCC1Q9HA90 598 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 GINM1Q9NU53 330 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
SNX6-208ENST00000556712 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
SNX6-208ENST00000556712 A0A0D9SFI3 127 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 MINDY4BA8MYZ0 360 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 FOXP2O15409 715 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 APPP05067 770 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 BCRP11274 1271 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 CDK8P49336 464 aa12.43□□□□□ -0.42
SNX6-208ENST00000556712 FBXO46Q6PJ61 603 aaPredicted RBP12.43□□□□□ -0.42
SNX6-208ENST00000556712 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
SNX6-208ENST00000556712 FAM227BQ96M60 508 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms