RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 INPP5BP32019 993 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 RGS3P49796 1198 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 MECOMQ03112 1051 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 TNNI3KQ59H18 835 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 CD99L2Q8TCZ2 262 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 BRI3BPQ8WY22 251 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 ZFRQ96KR1 1074 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 PTPN18Q99952 460 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 ZNF112Q9UJU3 913 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 FPGT-TNNI3KV9GXZ4 949 aa9.43□□□□□ -0.9
HNRNPC-226ENST00000556628 IRF6O14896 467 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 MCAMP43121 646 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 SOX10P56693 466 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 KIF22Q14807 665 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 OTOP1Q7RTM1 612 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 ERC1Q8IUD2 1116 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 CHMP4BQ9H444 224 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 EFCC1Q9HA90 598 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 ZCCHC17Q9NP64 241 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 PICK1Q9NRD5 415 aa9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-226ENST00000556628 GPR75-ASB3A0A0A6YYF3 556 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 BAG3O95817 575 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 RLBP1P12271 317 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 HSP90AB4PQ58FF6 505 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 SMYD5Q6GMV2 418 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 PI16Q6UXB8 463 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 TBC1D9Q6ZT07 1266 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 ZFPM1Q8IX07 1006 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 PANK1Q8TE04 598 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 DBNDD2Q9BQY9 259 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 NOP58Q9Y2X3 529 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
HNRNPC-226ENST00000556628 BTBD19C9JJ37 291 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 CXCL11O14625 94 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 TLR2O60603 784 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 IGSF3O75054 1194 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 NAA16Q6N069 864 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 CEP85Q6P2H3 762 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 ANKRD23Q86SG2 305 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 TEX11Q8IYF3 940 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 ZNF512BQ96KM6 892 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 CCDC8Q9H0W5 538 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 DDX19BQ9UMR2 479 aa9.4□□□□□ -0.9
HNRNPC-226ENST00000556628 DOCK1Q14185 1865 aa9.4□□□□□ -0.91
HNRNPC-226ENST00000556628 RFX7Q2KHR2 1363 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 DDTLA6NHG4 134 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 CTNND1O60716 968 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 HMMRO75330 724 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 ZAP70P43403 619 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 RHBDL3P58872 404 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 SCYL3Q8IZE3 742 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 OSBPL5Q9H0X9 879 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 KCNH4Q9UQ05 1017 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 PTPN22Q9Y2R2 807 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 ZHX2Q9Y6X8 837 aa9.39□□□□□ -0.91
HNRNPC-226ENST00000556628 ATRNL1Q5VV63 1379 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 PDHXO00330 501 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 KCNC4Q03721 635 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 GADL1Q6ZQY3 521 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 NBPF11Q86T75 865 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 AACSQ86V21 672 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 ZNF384Q8TF68 577 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 DHX36Q9H2U1 1008 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 AATFQ9NY61 560 aaKnown RBP eCLIP9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 COL2A1P02458 1487 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 MYO5AQ9Y4I1 1855 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-226ENST00000556628 PHF20L1A8MW92 1017 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 IDH1O75874 414 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 GNRH1P01148 92 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 PTPRAP18433 802 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 CERS3Q8IU89 383 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 CLASRPQ8N2M8 674 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 SH3RF3Q8TEJ3 882 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 EAF2Q96CJ1 260 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 PARK7Q99497 189 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
HNRNPC-226ENST00000556628 CPA4Q9UI42 421 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms