RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
MARK3-210ENST00000556463 A0A1B0GTH6 734 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 KIF1CO43896 1103 aaKnown RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 GBP2P32456 591 aaPredicted RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 GNG11P61952 73 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 PNKPQ96T60 521 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 CAPN7Q9Y6W3 813 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 MST1RQ04912 1400 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 POTEB2H3BUK9 544 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 M0R2C6 588 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 RHOXF2BP0C7M4 288 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 FOXO4P98177 505 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 ACTN3Q08043 901 aaPredicted RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 PNOCQ13519 176 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 MORC3Q14149 939 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 RASGRP2Q7LDG7 609 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 NOC3LQ8WTT2 800 aaKnown RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 LTV1Q96GA3 475 aaPredicted RBP9.71□□□□□ -0.85
MARK3-210ENST00000556463 RHOXF2Q9BQY4 288 aa9.71□□□□□ -0.85
MARK3-210ENST00000556463 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.85
MARK3-210ENST00000556463 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.86
MARK3-210ENST00000556463 NID2Q14112 1375 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 WDR17Q8IZU2 1322 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 RNF113AO15541 343 aaKnown RBP9.71□□□□□ -0.86
MARK3-210ENST00000556463 CCT5P48643 541 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 AARSP49588 968 aaKnown RBP eCLIP9.71□□□□□ -0.86
MARK3-210ENST00000556463 E2F5Q15329 346 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 CFAP100Q494V2 611 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 LONRF3Q496Y0 759 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 CTCFLQ8NI51 663 aaPredicted RBP9.71□□□□□ -0.86
MARK3-210ENST00000556463 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.86
MARK3-210ENST00000556463 VEZTQ9HBM0 779 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 RBM28Q9NW13 759 aaKnown RBP9.71□□□□□ -0.86
MARK3-210ENST00000556463 CDC23Q9UJX2 597 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
MARK3-210ENST00000556463 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 SERPINC1P01008 464 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 CDR1P51861 262 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 SF3A1Q15459 793 aaKnown RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 HSP90AA4PQ58FG1 418 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 WDR93Q6P2C0 686 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 HDXQ7Z353 690 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 NAA15Q9BXJ9 866 aaKnown RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 GJB4Q9NTQ9 266 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 PCDHA5Q9Y5H7 936 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 PPP1R12AO14974 1030 aaPredicted RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 CHMP4BP1P59074 171 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 FMR1Q06787 632 aaKnown RBP eCLIP9.7□□□□□ -0.86
MARK3-210ENST00000556463 TADA2BQ86TJ2 420 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 HINFPQ9BQA5 517 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 EIF4E1BA6NMX2 242 aaKnown RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 SMARCC1Q92922 1105 aaPredicted RBP9.7□□□□□ -0.86
MARK3-210ENST00000556463 OSBP2Q969R2 916 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 NBPF3Q9H094 633 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 PRDM16Q9HAZ2 1276 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 AKAP2Q9Y2D5 859 aa9.7□□□□□ -0.86
MARK3-210ENST00000556463 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 ENO4A6NNW6 628 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
MARK3-210ENST00000556463 CORO7P57737 925 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 AMPD2Q01433 879 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 NTRK3Q16288 839 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 RAD9BQ6WBX8 426 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 CHST3Q7LGC8 479 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 VIPAS39Q9H9C1 493 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
MARK3-210ENST00000556463 MAN1B1Q9UKM7 699 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 SAMM50Q9Y512 469 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 ATRNO75882 1429 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 H7C1W4 665 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 INPP5BP32019 993 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 FKBP15Q5T1M5 1219 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 LRRC31Q6UY01 552 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 TRIML1Q8N9V2 468 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 CNNM3Q8NE01 707 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 ODF2LQ9ULJ1 636 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 AKAP11Q9UKA4 1901 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 SETD1BQ9UPS6 1966 aaKnown RBP9.69□□□□□ -0.86
MARK3-210ENST00000556463 EBAG9O00559 213 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 N4BP1O75113 896 aaKnown RBP9.69□□□□□ -0.86
MARK3-210ENST00000556463 TUBBP07437 444 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 SF3A3Q12874 501 aaKnown RBP eCLIP9.69□□□□□ -0.86
MARK3-210ENST00000556463 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 MLKLQ8NB16 471 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
MARK3-210ENST00000556463 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
MARK3-210ENST00000556463 ZMYM6O95789 1325 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 ABCC12Q96J65 1359 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 ADKP55263 362 aaKnown RBP9.68□□□□□ -0.86
MARK3-210ENST00000556463 NEXNQ0ZGT2 675 aa9.68□□□□□ -0.86
MARK3-210ENST00000556463 MTF1Q14872 753 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms