RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 TNPO2O14787 897 aaKnown RBP13.3□□□□□ -0.28
SYNE2-221ENST00000556342 ZBTB7BO15156 539 aaPredicted RBP13.3□□□□□ -0.28
SYNE2-221ENST00000556342 ELNP15502 786 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 ADORA1P30542 326 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 PSEN2P49810 448 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 IRF5Q13568 498 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 PA2G4Q9UQ80 394 aaKnown RBP13.3□□□□□ -0.28
SYNE2-221ENST00000556342 PCDHGA10Q9Y5H3 936 aa13.3□□□□□ -0.28
SYNE2-221ENST00000556342 TRIM75PA6NK02 468 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
SYNE2-221ENST00000556342 CAPN2P17655 700 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 BTDP43251 543 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 SLFN5Q08AF3 891 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 SLF2Q8IX21 1173 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
SYNE2-221ENST00000556342 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 PDS5AQ29RF7 1337 aaKnown RBP13.29□□□□□ -0.28
SYNE2-221ENST00000556342 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
SYNE2-221ENST00000556342 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 PICALMQ13492 652 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 CCDC84Q86UT8 332 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-221ENST00000556342 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 KCNK17Q96T54 332 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 COPRSQ9NQ92 184 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 PAK6Q9NQU5 681 aaPredicted RBP13.28□□□□□ -0.28
SYNE2-221ENST00000556342 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 MROH7-TTC4A0A0A0MT08 1334 aa13.28□□□□□ -0.28
SYNE2-221ENST00000556342 TK2O00142 265 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.29
SYNE2-221ENST00000556342 PTPREP23469 700 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 RHBDL3P58872 404 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 FAM110CQ1W6H9 321 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 TREML2Q5T2D2 321 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 SPTY2D1Q68D10 685 aaPredicted RBP13.27□□□□□ -0.29
SYNE2-221ENST00000556342 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 ANKRD13CQ8N6S4 541 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 COA7Q96BR5 231 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 EPAS1Q99814 870 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 PNMA3Q9UL41 463 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 MGAMO43451 1857 aa13.27□□□□□ -0.29
SYNE2-221ENST00000556342 GPR75-ASB3A0A0A6YYF3 556 aa13.26□□□□□ -0.29
SYNE2-221ENST00000556342 A0A1W2PPC1 479 aa13.26□□□□□ -0.29
SYNE2-221ENST00000556342 TIMM10P62072 90 aa13.26□□□□□ -0.29
SYNE2-221ENST00000556342 MECOMQ03112 1051 aa13.26□□□□□ -0.29
SYNE2-221ENST00000556342 MYH2Q9UKX2 1941 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 A0A1B0GUL7 405 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 ZNF384Q8TF68 577 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 XAGE2Q96GT9 111 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 PAWRQ96IZ0 340 aaKnown RBP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 MEIS3Q99687 375 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 OSBPL5Q9H0X9 879 aaPredicted RBP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 NOB1Q9ULX3 412 aaKnown RBP13.25□□□□□ -0.29
SYNE2-221ENST00000556342 PTPRFP10586 1907 aa13.25□□□□□ -0.29
SYNE2-221ENST00000556342 GCLCP48506 637 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-221ENST00000556342 SPP2Q13103 211 aa13.24□□□□□ -0.29
SYNE2-221ENST00000556342 ZNF280CQ8ND82 737 aa13.24□□□□□ -0.29
SYNE2-221ENST00000556342 DIS3LQ8TF46 1054 aaKnown RBP13.24□□□□□ -0.29
SYNE2-221ENST00000556342 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.29
SYNE2-221ENST00000556342 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
SYNE2-221ENST00000556342 AKAP2Q9Y2D5 859 aa13.24□□□□□ -0.29
SYNE2-221ENST00000556342 COL6A3P12111 3177 aa13.24□□□□□ -0.29
SYNE2-221ENST00000556342 A0A0C4DFX4 3053 aa13.24□□□□□ -0.29
SYNE2-221ENST00000556342 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-221ENST00000556342 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-221ENST00000556342 MAP4K4O95819 1239 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-221ENST00000556342 HMGCRP04035 888 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 CAP2P40123 477 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 HMGCS2P54868 508 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 TFCP2Q12800 502 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 PABPC4Q13310 644 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNE2-221ENST00000556342 NECAB2Q7Z6G3 386 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
SYNE2-221ENST00000556342 TBC1D2Q9BYX2 928 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 HMG20BQ9P0W2 317 aa13.23□□□□□ -0.29
SYNE2-221ENST00000556342 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
SYNE2-221ENST00000556342 LDHCP07864 332 aa13.22□□□□□ -0.29
SYNE2-221ENST00000556342 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
SYNE2-221ENST00000556342 GSTO1P78417 241 aa13.22□□□□□ -0.29
SYNE2-221ENST00000556342 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
SYNE2-221ENST00000556342 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
SYNE2-221ENST00000556342 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
SYNE2-221ENST00000556342 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
SYNE2-221ENST00000556342 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms