RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
ATXN3-239ENST00000556315 NACC1Q96RE7 527 aa6.6□□□□□ -1.35
ATXN3-239ENST00000556315 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
ATXN3-239ENST00000556315 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-239ENST00000556315 EFCC1Q9HA90 598 aa6.6□□□□□ -1.35
ATXN3-239ENST00000556315 TPSG1Q9NRR2 321 aa6.6□□□□□ -1.35
ATXN3-239ENST00000556315 N4BP2Q86UW6 1770 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-239ENST00000556315 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATXN3-239ENST00000556315 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
ATXN3-239ENST00000556315 BTLAQ7Z6A9 289 aa6.59□□□□□ -1.35
ATXN3-239ENST00000556315 RGPD2P0DJD1 1756 aa6.59□□□□□ -1.35
ATXN3-239ENST00000556315 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
ATXN3-239ENST00000556315 PCNTO95613 3336 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 STARD3NLO95772 234 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-239ENST00000556315 HIF1AQ16665 826 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-239ENST00000556315 IER5Q5VY09 327 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 B4GALNT3Q6L9W6 998 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-239ENST00000556315 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 BHMTQ93088 406 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 TRAIPQ9BWF2 469 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
ATXN3-239ENST00000556315 LILRB5O75023 590 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
ATXN3-239ENST00000556315 EPHX2P34913 555 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 EIF5P55010 431 aaKnown RBP6.57□□□□□ -1.36
ATXN3-239ENST00000556315 GRIK4Q16099 956 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 AKAP4Q5JQC9 854 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 ZMYM1Q5SVZ6 1142 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 SULT6B1Q6IMI4 303 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 AEBP1Q8IUX7 1158 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 SCG3Q8WXD2 468 aaKnown RBP6.57□□□□□ -1.36
ATXN3-239ENST00000556315 CLP1Q92989 425 aaKnown RBP6.57□□□□□ -1.36
ATXN3-239ENST00000556315 MASTLQ96GX5 879 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 HINFPQ9BQA5 517 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 LGR6Q9HBX8 967 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 ABT1Q9ULW3 272 aaKnown RBP6.57□□□□□ -1.36
ATXN3-239ENST00000556315 SLC6A14Q9UN76 642 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 TNRC6CQ9HCJ0 1690 aaKnown RBP6.57□□□□□ -1.36
ATXN3-239ENST00000556315 ITGB4P16144 1822 aa6.57□□□□□ -1.36
ATXN3-239ENST00000556315 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
ATXN3-239ENST00000556315 DYRK3O43781 588 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 SRGNP10124 158 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 ECE1P42892 770 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 FOXD4L6Q3SYB3 417 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-239ENST00000556315 TBC1D9BQ66K14 1250 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 FOXD4L3Q6VB84 417 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-239ENST00000556315 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-239ENST00000556315 SETDB2Q96T68 719 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 TEX13AQ9BXU3 409 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-239ENST00000556315 GSX2Q9BZM3 304 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 DMGDHQ9UI17 866 aaKnown RBP6.56□□□□□ -1.36
ATXN3-239ENST00000556315 COL15A1P39059 1388 aa6.56□□□□□ -1.36
ATXN3-239ENST00000556315 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 A0A0A0MRY4 1105 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 C9orf172C9J069 976 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 NPHP1O15259 732 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 SELPP16109 830 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 MAP2K2P36507 400 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 ST5P78524 1137 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 ADGRE1Q14246 886 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 RTN1Q16799 776 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 CCDC93Q567U6 631 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 MAP1SQ66K74 1059 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-239ENST00000556315 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
ATXN3-239ENST00000556315 NPM2Q86SE8 214 aaKnown RBP6.55□□□□□ -1.36
ATXN3-239ENST00000556315 RTKN2Q8IZC4 609 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 CNBD1Q8NA66 436 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 UBE2OQ9C0C9 1292 aaKnown RBP6.55□□□□□ -1.36
ATXN3-239ENST00000556315 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-239ENST00000556315 CARMIL3Q8ND23 1372 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 ZNF831Q5JPB2 1677 aa6.55□□□□□ -1.36
ATXN3-239ENST00000556315 TGFBR3LH3BV60 316 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 FZD9O00144 591 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 ELNP15502 786 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 IL13P35225 146 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 IL6STP40189 918 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-239ENST00000556315 FKBP4Q02790 459 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-239ENST00000556315 TTC5Q8N0Z6 440 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 GPC2Q8N158 579 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 LENG1Q96BZ8 264 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-239ENST00000556315 CAPNS2Q96L46 248 aa6.54□□□□□ -1.36
ATXN3-239ENST00000556315 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-239ENST00000556315 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
ATXN3-239ENST00000556315 KLRG2A4D1S0 409 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-239ENST00000556315 CA12O43570 354 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 NPR1P16066 1061 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 IGFBP4P22692 258 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 GRNP28799 593 aaKnown RBP6.53□□□□□ -1.36
ATXN3-239ENST00000556315 ALDH1B1P30837 517 aa6.53□□□□□ -1.36
ATXN3-239ENST00000556315 AFF1P51825 1210 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms