RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZCCHC17Q9NP64 241 aaKnown RBP13.93□□□□□ -0.18
SLIRP-205ENST00000556310 GPR25O00155 361 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 CXCL11O14625 94 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 MBD4O95243 580 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 EVX2Q03828 476 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 CRHR2Q13324 411 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 FOXP4Q8IVH2 680 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-205ENST00000556310 FAM43AQ8N2R8 423 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-205ENST00000556310 ZNF296Q8WUU4 475 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-205ENST00000556310 TRIM34Q9BYJ4 488 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 EHD4Q9H223 541 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 R3HDMLQ9H3Y0 253 aa13.92□□□□□ -0.18
SLIRP-205ENST00000556310 BTBD19C9JJ37 291 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 CAP2P40123 477 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 TAF1CQ15572 869 aaPredicted RBP13.91□□□□□ -0.18
SLIRP-205ENST00000556310 SLFNL1Q499Z3 407 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 IFFO2Q5TF58 517 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 TTC6Q86TZ1 520 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 ARMT1Q9H993 441 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 AFG3L2Q9Y4W6 797 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 ZHX2Q9Y6X8 837 aa13.91□□□□□ -0.18
SLIRP-205ENST00000556310 A0A0G2JLL6 359 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 FKTNO75072 461 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 CHGBP05060 677 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 ZFYP08048 801 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 RRP1BQ14684 758 aaKnown RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 PRRT2Q7Z6L0 340 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 ANKRD23Q86SG2 305 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 SDR42E1Q8WUS8 393 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 GINM1Q9NU53 330 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-205ENST00000556310 STAP2Q9UGK3 403 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 SERPINB13Q9UIV8 391 aa13.9□□□□□ -0.18
SLIRP-205ENST00000556310 IGHDP01880 384 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 ASNSP08243 561 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 MOGSQ13724 837 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 CTU1Q7Z7A3 348 aaKnown RBP13.89□□□□□ -0.19
SLIRP-205ENST00000556310 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-205ENST00000556310 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 APPBP2Q92624 585 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 LNPKQ9C0E8 428 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
SLIRP-205ENST00000556310 ZFYVE28Q9HCC9 887 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 MCM9Q9NXL9 1143 aa13.89□□□□□ -0.19
SLIRP-205ENST00000556310 TRIM75PA6NK02 468 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 RNF113AO15541 343 aaKnown RBP13.88□□□□□ -0.19
SLIRP-205ENST00000556310 POLR3DP05423 398 aaPredicted RBP13.88□□□□□ -0.19
SLIRP-205ENST00000556310 PDE1AP54750 535 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 IRX6P78412 446 aaPredicted RBP13.88□□□□□ -0.19
SLIRP-205ENST00000556310 DGKZQ13574 1117 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 TATDN1Q6P1N9 297 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 FASTKD5Q7L8L6 764 aaKnown RBP13.88□□□□□ -0.19
SLIRP-205ENST00000556310 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 ZBTB21Q9ULJ3 1066 aa13.88□□□□□ -0.19
SLIRP-205ENST00000556310 PDHXO00330 501 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 PRKAB2O43741 272 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 GDF11O95390 407 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 PLCD1P51178 756 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 NUCB1Q02818 461 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 GABPAQ06546 454 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 ZNF280CQ8ND82 737 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 OSBP2Q969R2 916 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 DDRGK1Q96HY6 314 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 AS3MTQ9HBK9 375 aa13.87□□□□□ -0.19
SLIRP-205ENST00000556310 TLR2O60603 784 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 SHMT1P34896 483 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 JAG1P78504 1218 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 B4GALNT3Q6L9W6 998 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 GPAT2Q6NUI2 795 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 GADL1Q6ZQY3 521 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 ERO1AQ96HE7 468 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 ABHD8Q96I13 439 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
SLIRP-205ENST00000556310 PARK7Q99497 189 aaKnown RBP13.86□□□□□ -0.19
SLIRP-205ENST00000556310 WDR18Q9BV38 432 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 SLC45A1Q9Y2W3 748 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 SLC4A4Q9Y6R1 1079 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 ADGRA2Q96PE1 1338 aa13.86□□□□□ -0.19
SLIRP-205ENST00000556310 ZSWIM8A7E2V4 1837 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 GPAA1O43292 621 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 GH2P01242 217 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 CYP2D6P10635 497 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 SP3Q02447 781 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 SPP2Q13103 211 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 PKN2Q16513 984 aaKnown RBP13.85□□□□□ -0.19
SLIRP-205ENST00000556310 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-205ENST00000556310 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-205ENST00000556310 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 AGTPBP1Q9UPW5 1226 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms