RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 TAB3Q8N5C8 712 aaPredicted RBP6.44□□□□□ -1.38
CDKN3-210ENST00000556305 FAM13CQ8NE31 585 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 MRFAP1L1Q96HT8 127 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 ZSWIM4Q9H7M6 989 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 CORINQ9Y5Q5 1042 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 HCLS1P14317 486 aaPredicted RBP6.43□□□□□ -1.38
CDKN3-210ENST00000556305 RAG1P15918 1043 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 GUCY2CP25092 1073 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 TTLL4Q14679 1199 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 FXNQ16595 210 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 ZMYM1Q5SVZ6 1142 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 OVOS1Q6IE37 1185 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 SHISA2Q6UWI4 295 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 NLRC3Q7RTR2 1065 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 AGGF1Q8N302 714 aaeCLIP6.43□□□□□ -1.38
CDKN3-210ENST00000556305 HNRNPLLQ8WVV9 542 aaKnown RBP6.43□□□□□ -1.38
CDKN3-210ENST00000556305 MKL1Q969V6 931 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 DISC1Q9NRI5 854 aa6.43□□□□□ -1.38
CDKN3-210ENST00000556305 C1QTNF9BB2RNN3 333 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 DRD2P14416 443 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 CCNFP41002 786 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 CASP7P55210 303 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 INTS3Q68E01 1043 aaKnown RBP6.42□□□□□ -1.38
CDKN3-210ENST00000556305 MCATQ8IVS2 390 aaKnown RBP6.42□□□□□ -1.38
CDKN3-210ENST00000556305 MRPL41Q8IXM3 137 aaKnown RBP6.42□□□□□ -1.38
CDKN3-210ENST00000556305 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
CDKN3-210ENST00000556305 PHACTR4Q8IZ21 702 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 TMEM87BQ96K49 555 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 PCOLCE2Q9UKZ9 415 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
CDKN3-210ENST00000556305 ACTL7BQ9Y614 415 aa6.42□□□□□ -1.38
CDKN3-210ENST00000556305 SLC22A31A6NKX4 558 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 KLF4O43474 513 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
CDKN3-210ENST00000556305 MAP7Q14244 749 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 ARSHQ5FYA8 562 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 CDCP2Q5VXM1 449 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 LARP1BQ659C4 914 aaKnown RBP6.41□□□□□ -1.38
CDKN3-210ENST00000556305 Q6ZS46 218 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 LRP10Q7Z4F1 713 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 CD163Q86VB7 1156 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDKN3-210ENST00000556305 SLFN12Q8IYM2 578 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 C2CD4AQ8NCU7 369 aaPredicted RBP6.41□□□□□ -1.38
CDKN3-210ENST00000556305 ACSF2Q96CM8 615 aaPredicted RBP6.41□□□□□ -1.38
CDKN3-210ENST00000556305 GSX1Q9H4S2 264 aaPredicted RBP6.41□□□□□ -1.38
CDKN3-210ENST00000556305 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
CDKN3-210ENST00000556305 TNFRSF10CO14798 259 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 RAB6AP20340 208 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 CANXP27824 592 aaKnown RBP6.4□□□□□ -1.38
CDKN3-210ENST00000556305 CAP2P40123 477 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 PREPP48147 710 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 BMS1Q14692 1282 aaKnown RBP6.4□□□□□ -1.38
CDKN3-210ENST00000556305 BBS9Q3SYG4 887 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-210ENST00000556305 TTC6Q86TZ1 520 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 FAM169BQ8N8A8 192 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 WFDC12Q8WWY7 111 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 UTP4Q969X6 686 aaKnown RBP6.4□□□□□ -1.38
CDKN3-210ENST00000556305 ISL2Q96A47 359 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 ATG4CQ96DT6 458 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 DHRS1Q96LJ7 313 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 SRPK1Q96SB4 655 aaKnown RBP6.4□□□□□ -1.38
CDKN3-210ENST00000556305 FOXQ1Q9C009 403 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 PHAXQ9H814 394 aaKnown RBP6.4□□□□□ -1.38
CDKN3-210ENST00000556305 FAM105AQ9NUU6 356 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 TJP2Q9UDY2 1190 aa6.4□□□□□ -1.38
CDKN3-210ENST00000556305 LRIG2O94898 1065 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 ALX3O95076 343 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 CST3P01034 146 aaPredicted RBP6.39□□□□□ -1.39
CDKN3-210ENST00000556305 RXRBP28702 533 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 GBP1P32455 592 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 CHRNA4P43681 627 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 IREB2P48200 963 aaKnown RBP6.39□□□□□ -1.39
CDKN3-210ENST00000556305 IFRD2Q12894 506 aaPredicted RBP6.39□□□□□ -1.39
CDKN3-210ENST00000556305 SERINC3Q13530 473 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 ADGRE1Q14246 886 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 DDR2Q16832 855 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 TXNRD3Q86VQ6 643 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 MFSD2AQ8NA29 543 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 GIMAP7Q8NHV1 300 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 CYB5D2Q8WUJ1 264 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 CCDC74BQ96LY2 380 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 MAPK8IP1Q9UQF2 711 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 DAGLAQ9Y4D2 1042 aa6.39□□□□□ -1.39
CDKN3-210ENST00000556305 CHURC1-FNTBB4DL54 471 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 DDAH1O94760 285 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 NEFMP07197 916 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 NAT2P11245 290 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 NOS3P29474 1203 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 NTF4P34130 210 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 MBTPS1Q14703 1052 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 NCAPHQ15003 741 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 ZNF746Q6NUN9 644 aaPredicted RBP6.38□□□□□ -1.39
CDKN3-210ENST00000556305 RUFY4Q6ZNE9 571 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 FAM46AQ96IP4 442 aaKnown RBP6.38□□□□□ -1.39
CDKN3-210ENST00000556305 SEMA6BQ9H3T3 888 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 ANTXR1Q9H6X2 564 aa6.38□□□□□ -1.39
CDKN3-210ENST00000556305 CDK11AQ9UQ88 783 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms