RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 FARP2O94887 1054 aaPredicted RBP16.25■□□□□ 0.19
TGFB3-204ENST00000556285 SGPL1O95470 568 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 PLCG2P16885 1265 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 UBXN2AP68543 259 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 MTMR2Q13614 643 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 SH3D19Q5HYK7 790 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
TGFB3-204ENST00000556285 MIGA1Q8NAN2 632 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
TGFB3-204ENST00000556285 LAMA3Q16787 3333 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 IRF5Q13568 498 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 POTEEQ6S8J3 1075 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 DEFB118Q96PH6 123 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 WDR18Q9BV38 432 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 PAK6Q9NQU5 681 aaPredicted RBP16.24■□□□□ 0.19
TGFB3-204ENST00000556285 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
TGFB3-204ENST00000556285 AACSQ86V21 672 aa16.23■□□□□ 0.19
TGFB3-204ENST00000556285 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
TGFB3-204ENST00000556285 CRACR2BQ8N4Y2 399 aaPredicted RBP16.23■□□□□ 0.19
TGFB3-204ENST00000556285 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
TGFB3-204ENST00000556285 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
TGFB3-204ENST00000556285 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
TGFB3-204ENST00000556285 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
TGFB3-204ENST00000556285 GJD2Q9UKL4 321 aa16.23■□□□□ 0.19
TGFB3-204ENST00000556285 ZBED9Q6R2W3 1325 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 SOX1O00570 391 aaPredicted RBP16.22■□□□□ 0.19
TGFB3-204ENST00000556285 ASNSP08243 561 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 GCLCP48506 637 aaPredicted RBP16.22■□□□□ 0.19
TGFB3-204ENST00000556285 MNX1P50219 401 aaPredicted RBP16.22■□□□□ 0.19
TGFB3-204ENST00000556285 BACE1P56817 501 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 PXYLP1Q8TE99 480 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 COA7Q96BR5 231 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
TGFB3-204ENST00000556285 CRISPLD2Q9H0B8 497 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
TGFB3-204ENST00000556285 PAWRQ96IZ0 340 aaKnown RBP16.21■□□□□ 0.19
TGFB3-204ENST00000556285 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
TGFB3-204ENST00000556285 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
TGFB3-204ENST00000556285 COL6A3P12111 3177 aa16.21■□□□□ 0.19
TGFB3-204ENST00000556285 NAV1Q8NEY1 1877 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 APBB1O00213 710 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 GH2P01242 217 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 USP5P45974 858 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 EVX2Q03828 476 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 PABPC4Q13310 644 aaKnown RBP eCLIP16.2■□□□□ 0.18
TGFB3-204ENST00000556285 RHPN1Q8TCX5 695 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
TGFB3-204ENST00000556285 EMILIN3Q9NT22 766 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 TMOD4Q9NZQ9 345 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 MORF4L1Q9UBU8 362 aa16.2■□□□□ 0.18
TGFB3-204ENST00000556285 TFRCP02786 760 aaKnown RBP16.19■□□□□ 0.18
TGFB3-204ENST00000556285 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
TGFB3-204ENST00000556285 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
TGFB3-204ENST00000556285 SIRT2Q8IXJ6 389 aa16.19■□□□□ 0.18
TGFB3-204ENST00000556285 TRIB2Q92519 343 aa16.19■□□□□ 0.18
TGFB3-204ENST00000556285 HTATIP2Q9BUP3 242 aa16.19■□□□□ 0.18
TGFB3-204ENST00000556285 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
TGFB3-204ENST00000556285 RBPJLQ9UBG7 517 aa16.19■□□□□ 0.18
TGFB3-204ENST00000556285 C19orf81C9J6K1 198 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 IGSF3O75054 1194 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 HOXA7P31268 230 aaPredicted RBP16.18■□□□□ 0.18
TGFB3-204ENST00000556285 HERVK_113P62684 666 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
TGFB3-204ENST00000556285 ZYXQ15942 572 aaKnown RBP16.18■□□□□ 0.18
TGFB3-204ENST00000556285 Q3C1V9 767 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 TATDN1Q6P1N9 297 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 LRCH3Q96II8 777 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 RIOK1Q9BRS2 568 aaKnown RBP16.18■□□□□ 0.18
TGFB3-204ENST00000556285 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
TGFB3-204ENST00000556285 RLFQ13129 1914 aa16.17■□□□□ 0.18
TGFB3-204ENST00000556285 PLCD1P51178 756 aa16.17■□□□□ 0.18
TGFB3-204ENST00000556285 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
TGFB3-204ENST00000556285 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
TGFB3-204ENST00000556285 GINM1Q9NU53 330 aa16.17■□□□□ 0.18
TGFB3-204ENST00000556285 MYH8P13535 1937 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 CYP2B6P20813 491 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 PORCNQ9H237 461 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 SERPINB13Q9UIV8 391 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 PARP14Q460N5 1801 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 DNAH12Q6ZR08 3092 aa16.16■□□□□ 0.18
TGFB3-204ENST00000556285 MAGEB6P1A0A0J9YX57 407 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 EVI5O60447 810 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 HMGCRP04035 888 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 PDE6AP16499 860 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 SHMT1P34896 483 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 CCL14Q16627 93 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 USP17L2Q6R6M4 530 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 PAGR1Q9BTK6 254 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 EHD4Q9H223 541 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
TGFB3-204ENST00000556285 BAZ2AQ9UIF9 1905 aaKnown RBP16.14■□□□□ 0.17
TGFB3-204ENST00000556285 GOLIM4O00461 696 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms