RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GINM1Q9NU53 330 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 ZBTB21Q9ULJ3 1066 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 DOCK1Q14185 1865 aa18.24■□□□□ 0.51
ACTN1-217ENST00000556203 DDX60LQ5H9U9 1706 aaKnown RBP18.23■□□□□ 0.51
ACTN1-217ENST00000556203 CYP2D7A0A087X1C5 515 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 USP17L12C9JPN9 530 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 USP17L21D6R901 530 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 PDHXO00330 501 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 FKTNO75072 461 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 GH2P01242 217 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 CERKLQ49MI3 558 aaPredicted RBP18.23■□□□□ 0.51
ACTN1-217ENST00000556203 GADL1Q6ZQY3 521 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
ACTN1-217ENST00000556203 NAV1Q8NEY1 1877 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 MYH7P12883 1935 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 GSG1L2A8MUP6 293 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 GNAT2P19087 354 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 C12orf60Q5U649 245 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 GPAT2Q6NUI2 795 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 CTR9Q6PD62 1173 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 SLC44A5Q8NCS7 719 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 DYNLL2Q96FJ2 89 aa18.22■□□□□ 0.51
ACTN1-217ENST00000556203 MYH1P12882 1939 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 SMIM22K7EJ46 135 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 APPP05067 770 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 PDE4AP27815 886 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 DGKZQ13574 1117 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 ABCB5Q2M3G0 1257 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 WDR18Q9BV38 432 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 ARPP21Q9UBL0 812 aaPredicted RBP18.21■□□□□ 0.51
ACTN1-217ENST00000556203 SWAP70Q9UH65 585 aa18.21■□□□□ 0.51
ACTN1-217ENST00000556203 HMGCS2P54868 508 aa18.2■□□□□ 0.5
ACTN1-217ENST00000556203 MTMR2Q13614 643 aa18.2■□□□□ 0.5
ACTN1-217ENST00000556203 RAB3GAP1Q15042 981 aa18.2■□□□□ 0.5
ACTN1-217ENST00000556203 GIMAP6Q6P9H5 292 aa18.2■□□□□ 0.5
ACTN1-217ENST00000556203 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
ACTN1-217ENST00000556203 CABP5Q9NP86 173 aa18.2■□□□□ 0.5
ACTN1-217ENST00000556203 TAOK2Q9UL54 1235 aa18.2■□□□□ 0.5
ACTN1-217ENST00000556203 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
ACTN1-217ENST00000556203 PATL2C9JE40 543 aaKnown RBP18.19■□□□□ 0.5
ACTN1-217ENST00000556203 TLR2O60603 784 aa18.19■□□□□ 0.5
ACTN1-217ENST00000556203 TDO2P48775 406 aa18.19■□□□□ 0.5
ACTN1-217ENST00000556203 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
ACTN1-217ENST00000556203 CTU1Q7Z7A3 348 aaKnown RBP18.19■□□□□ 0.5
ACTN1-217ENST00000556203 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
ACTN1-217ENST00000556203 MCOLN1Q9GZU1 580 aa18.19■□□□□ 0.5
ACTN1-217ENST00000556203 AGTPBP1Q9UPW5 1226 aa18.19■□□□□ 0.5
ACTN1-217ENST00000556203 MPHOSPH10O00566 681 aaKnown RBP18.18■□□□□ 0.5
ACTN1-217ENST00000556203 CYP2C8P10632 490 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 CDK8P49336 464 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 BACE1P56817 501 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 SP3Q02447 781 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 SBK1Q52WX2 424 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 SH3D19Q5HYK7 790 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 TREML2Q5T2D2 321 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 C16orf86Q6ZW13 317 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 TICAM2Q86XR7 235 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
ACTN1-217ENST00000556203 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 SLC45A1Q9Y2W3 748 aa18.18■□□□□ 0.5
ACTN1-217ENST00000556203 PHIPQ8WWQ0 1821 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 A0A0D9SFI3 127 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 USP17L10C9JJH3 530 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 GUCY1A2P33402 732 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 IFNL3Q8IZI9 196 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 ERO1AQ96HE7 468 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 CPA4Q9UI42 421 aa18.17■□□□□ 0.5
ACTN1-217ENST00000556203 C19orf81C9J6K1 198 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 AKR1B1P15121 316 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 SDSP20132 328 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 NMIQ13287 307 aaPredicted RBP18.16■□□□□ 0.5
ACTN1-217ENST00000556203 SEPT2Q15019 361 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 MCMDC2Q4G0Z9 681 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 STK11IPQ8N1F8 1099 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 CD99L2Q8TCZ2 262 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 FEZ1Q99689 392 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 ADGRA2Q96PE1 1338 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 ATAD5Q96QE3 1844 aa18.16■□□□□ 0.5
ACTN1-217ENST00000556203 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
ACTN1-217ENST00000556203 C17orf99Q6UX52 265 aa18.15■□□□□ 0.5
ACTN1-217ENST00000556203 TMEM179Q6ZVK1 233 aa18.15■□□□□ 0.5
ACTN1-217ENST00000556203 ACER1Q8TDN7 264 aa18.15■□□□□ 0.5
ACTN1-217ENST00000556203 NAPBQ9H115 298 aa18.15■□□□□ 0.5
ACTN1-217ENST00000556203 FOXP2O15409 715 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 ZYXQ15942 572 aaKnown RBP18.14■□□□□ 0.49
ACTN1-217ENST00000556203 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 VPS53Q5VIR6 699 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 USP17L2Q6R6M4 530 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 SMCR8Q8TEV9 937 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-217ENST00000556203 ABHD8Q96I13 439 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 CCDC17Q96LX7 622 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 EMILIN3Q9NT22 766 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 PNMA3Q9UL41 463 aa18.14■□□□□ 0.49
ACTN1-217ENST00000556203 TRIM17Q9Y577 477 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms