RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 MAP4K4O95819 1239 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-209ENST00000556079 ZBTB48P10074 688 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-209ENST00000556079 CYP2D6P10635 497 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 MS4A1P11836 297 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 CTGFP29279 349 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 IRX6P78412 446 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-209ENST00000556079 RPAP2Q8IXW5 612 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-209ENST00000556079 TGFBRAP1Q8WUH2 860 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 MARVELD3Q96A59 401 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 OSBPL5Q9H0X9 879 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-209ENST00000556079 BOLA2Q9H3K6 86 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 ZNF112Q9UJU3 913 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 PALD1Q9ULE6 856 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 PTPN22Q9Y2R2 807 aa7.79□□□□□ -1.16
TMEM260-209ENST00000556079 TESPA1A2RU30 521 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-209ENST00000556079 PRKAB2O43741 272 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 GDF11O95390 407 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 MYCP01106 439 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-209ENST00000556079 IFIT2P09913 472 aaKnown RBP7.78□□□□□ -1.16
TMEM260-209ENST00000556079 PRKCSHP14314 528 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-209ENST00000556079 PDE6AP16499 860 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 INHBEP58166 350 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 GSTO1P78417 241 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 PPIL2Q13356 520 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 TAF1CQ15572 869 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-209ENST00000556079 DCAF15Q66K64 600 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 GPAT2Q6NUI2 795 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 ERO1BQ86YB8 467 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 ERC1Q8IUD2 1116 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 GCC1Q96CN9 775 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 KIF1BPQ96EK5 621 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 ERO1AQ96HE7 468 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 ZNF512BQ96KM6 892 aaPredicted RBP7.78□□□□□ -1.16
TMEM260-209ENST00000556079 EFCC1Q9HA90 598 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 LOC285556D6RIA3 1793 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 DOCK3Q8IZD9 2030 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 ZNF532Q9HCE3 1301 aa7.78□□□□□ -1.16
TMEM260-209ENST00000556079 COL6A3P12111 3177 aa7.77□□□□□ -1.16
TMEM260-209ENST00000556079 CYP2D7A0A087X1C5 515 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 TCRBV5S4A2TA0A5A2 114 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 TRIM75PA6NK02 468 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 HMMRO75330 724 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 CYP2C8P10632 490 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 PTPRAP18433 802 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 SP3Q02447 781 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 NOL9Q5SY16 702 aaKnown RBP7.77□□□□□ -1.17
TMEM260-209ENST00000556079 GADL1Q6ZQY3 521 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 SCYL3Q8IZE3 742 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 CLASRPQ8N2M8 674 aaKnown RBP7.77□□□□□ -1.17
TMEM260-209ENST00000556079 LCORLQ8N3X6 602 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 ARMC5Q96C12 935 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 RIOK1Q9BRS2 568 aaKnown RBP7.77□□□□□ -1.17
TMEM260-209ENST00000556079 ARMT1Q9H993 441 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.77□□□□□ -1.17
TMEM260-209ENST00000556079 CPA4Q9UI42 421 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 ZHX2Q9Y6X8 837 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 MGAMO43451 1857 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 ADGRA2Q96PE1 1338 aa7.77□□□□□ -1.17
TMEM260-209ENST00000556079 MYH8P13535 1937 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 COL2A1P02458 1487 aaPredicted RBP7.76□□□□□ -1.17
TMEM260-209ENST00000556079 MBD4O95243 580 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 LDHCP07864 332 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 FXR1P51114 621 aaKnown RBP eCLIP7.76□□□□□ -1.17
TMEM260-209ENST00000556079 GTF2A2P52657 109 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 PPP4CP60510 307 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 SNAPC2Q13487 334 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 TREML2Q5T2D2 321 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 SLC9C2Q5TAH2 1124 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 OTUD7BQ6GQQ9 843 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 TMEM92Q6UXU6 159 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 CLEC10AQ8IUN9 316 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 SLF2Q8IX21 1173 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 SLC44A5Q8NCS7 719 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 SDR42E1Q8WUS8 393 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 ZNF333Q96JL9 665 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 LRRCC1Q9C099 1032 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 DCTPP1Q9H773 170 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 KCNH4Q9UQ05 1017 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 PTCH2Q9Y6C5 1203 aa7.76□□□□□ -1.17
TMEM260-209ENST00000556079 MAGEB6P1A0A0J9YX57 407 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 PDHXO00330 501 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 RAB11FIP3O75154 756 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 CETPP11597 493 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 PLCD1P51178 756 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 PPATQ06203 517 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 HSP90AB4PQ58FF6 505 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 DYNLL2Q96FJ2 89 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 NOL10Q9BSC4 688 aaKnown RBP7.75□□□□□ -1.17
TMEM260-209ENST00000556079 AFG3L2Q9Y4W6 797 aa7.75□□□□□ -1.17
TMEM260-209ENST00000556079 A0A0G2JLL6 359 aaPredicted RBP7.74□□□□□ -1.17
TMEM260-209ENST00000556079 UNCXA6NJT0 531 aa7.74□□□□□ -1.17
TMEM260-209ENST00000556079 ATP5JP18859 108 aa7.74□□□□□ -1.17
TMEM260-209ENST00000556079 ADD2P35612 726 aa7.74□□□□□ -1.17
TMEM260-209ENST00000556079 CAP2P40123 477 aa7.74□□□□□ -1.17
TMEM260-209ENST00000556079 USP5P45974 858 aa7.74□□□□□ -1.17
TMEM260-209ENST00000556079 HMGCS2P54868 508 aa7.74□□□□□ -1.17
TMEM260-209ENST00000556079 MAP3K12Q12852 859 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms