RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SRSF11Q05519 484 aaKnown RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 GNPTABQ3T906 1256 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 DALRD3Q5D0E6 543 aaKnown RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 MCATQ8IVS2 390 aaKnown RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 SLFN12Q8IYM2 578 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 RPUSD2Q8IZ73 545 aaKnown RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 ZBTB38Q8NAP3 1195 aaPredicted RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 GALNT11Q8NCW6 608 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 FAM13CQ8NE31 585 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 KLHL6Q8WZ60 621 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 SGSM3Q96HU1 749 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 DHRS1Q96LJ7 313 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 COL25A1Q9BXS0 654 aaPredicted RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 CWC22Q9HCG8 908 aaKnown RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 PICK1Q9NRD5 415 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 HIF3AQ9Y2N7 669 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 CD2APQ9Y5K6 639 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 H3BM21 787 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 ADCY3O60266 1144 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 ADAM11O75078 769 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 HCLS1P14317 486 aaPredicted RBP4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 CD68P34810 354 aaPredicted RBP4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 PMS1P54277 932 aaKnown RBP4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 PPM1JQ5JR12 505 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 RNFT1Q5M7Z0 435 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 EXOSC6Q5RKV6 272 aaKnown RBP4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 ZBTB37Q5TC79 503 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 SLC6A19Q695T7 634 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 C8orf86Q6ZUL3 223 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 CHSY3Q70JA7 882 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 ILDR2Q71H61 639 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 KRT26Q7Z3Y9 468 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 HID1Q8IV36 788 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 MRPL41Q8IXM3 137 aaKnown RBP4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 PHACTR4Q8IZ21 702 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 ZNF507Q8TCN5 953 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 EDARADDQ8WWZ3 215 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 NINJ1Q92982 152 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 ACDQ96AP0 544 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 TMEM87BQ96K49 555 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 RAD18Q9NS91 495 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 DDX56Q9NY93 547 aaKnown RBP4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 KLHL42Q9P2K6 505 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 TJP2Q9UDY2 1190 aa4.2□□□□□ -1.74
MTHFD1-212ENST00000555858 RGS13O14921 159 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 TMPRSS2O15393 492 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 DDX3YO15523 660 aaKnown RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 DLGAP3O95886 979 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 POLR2BP30876 1174 aaKnown RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 PLEKHG6Q3KR16 790 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 FOXD4L6Q3SYB3 417 aaPredicted RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 TM4SF20Q53R12 229 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 FOXD4L3Q6VB84 417 aaPredicted RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 C1orf229Q6ZS94 237 aaPredicted RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 DMRTC2Q8IXT2 367 aaPredicted RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 DTWD1Q8N5C7 304 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 GALNT6Q8NCL4 622 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 RNF214Q8ND24 703 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 SMARCC1Q92922 1105 aaPredicted RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 MFSD3Q96ES6 412 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 BTBD6Q96KE9 485 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 SLC6A18Q96N87 628 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 TYW1Q9NV66 732 aaKnown RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 CRIM1Q9NZV1 1036 aa4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 SUCOQ9UBS9 1254 aaKnown RBP4.19□□□□□ -1.74
MTHFD1-212ENST00000555858 ANKRD34BA5PLL1 514 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 OIP5O43482 229 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 RFPL3O75679 317 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 ADAMTS2O95450 1211 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 NID1P14543 1247 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 GBP1P32455 592 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 NTF4P34130 210 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 SV2CQ496J9 727 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 AKAP4Q5JQC9 854 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 NOL8Q76FK4 1167 aaKnown RBP4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 PPFIBP1Q86W92 1011 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 NIM1KQ8IY84 436 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 TMEM192Q8IY95 271 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 KCT2Q8NC54 265 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 CCDC74BQ96LY2 380 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 KIF2CQ99661 725 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 APBA2Q99767 749 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 TMPRSS13Q9BYE2 586 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 IRF2BPLQ9H1B7 796 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 ATXN3LQ9H3M9 355 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 LRRC4BQ9NT99 713 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 KCNK4Q9NYG8 393 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 PPP1R9AQ9ULJ8 1098 aa4.18□□□□□ -1.74
MTHFD1-212ENST00000555858 TRAV20A0A0B4J274 112 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 A0A1W2PQU0 124 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 MEGF11A6BM72 1044 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 PLD2O14939 933 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 DEAF1O75398 565 aaPredicted RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CLEC3AO75596 197 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 UBOX5O94941 541 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 AMPD1P23109 780 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CAP2P40123 477 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 PABPC4Q13310 644 aaKnown RBP eCLIP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 COL9A3Q14050 684 aaPredicted RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 HSP90AA2PQ14568 343 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms