RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 MYH8P13535 1937 aa11.35□□□□□ -0.59
HNRNPC-220ENST00000555585 CCDC69A6NI79 296 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 H7C1D1 291 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 GRIN3BO60391 1043 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 TFAP4Q01664 338 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 SYNE3Q6ZMZ3 975 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 ZFPM1Q8IX07 1006 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 GPC2Q8N158 579 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 CRACR2BQ8N4Y2 399 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 MTA3Q9BTC8 594 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
HNRNPC-220ENST00000555585 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 GOLGA8BA8MQT2 603 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 WNT10BO00744 389 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 PFKFB2O60825 505 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 TSPY3P0CV98 308 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 TSPY8P0CW00 308 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 RASA1P20936 1047 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 PDIA3P30101 505 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 NT5C2P49902 561 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 KIF4BQ2VIQ3 1234 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 NBPF9Q3BBW0 867 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 RAB11FIP4Q86YS3 637 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 TMTC2Q8N394 836 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 FAM151AQ8WW52 585 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 ZBED3Q96IU2 234 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 CWC22Q9HCG8 908 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 SWAP70Q9UH65 585 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 BRPF3Q9ULD4 1205 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 SMC3Q9UQE7 1217 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 TNKSO95271 1327 aa11.33□□□□□ -0.6
HNRNPC-220ENST00000555585 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 LIFRP42702 1097 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 TNNI2P48788 182 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 CCDC178Q5BJE1 867 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 SLC12A7Q9Y666 1083 aa11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-220ENST00000555585 SIPA1L1O43166 1804 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 GOLGA8AA7E2F4 631 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 ZBTB43O43298 467 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 METAP2P50579 478 aaKnown RBP eCLIP11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 EVCP57679 992 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 GABPAQ06546 454 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 ST3GAL1Q11201 340 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 SCRN1Q12765 414 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 SEC23AQ15436 765 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 FOXP4Q8IVH2 680 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 ENAHQ8N8S7 591 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 CSRNP1Q96S65 589 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 EHD4Q9H223 541 aa11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-220ENST00000555585 CNTNAP1P78357 1384 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 MPHOSPH10O00566 681 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 NMT2O60551 498 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 DTNBO60941 627 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 EGFRP00533 1210 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 RXRAP19793 462 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 GJB2P29033 226 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 MYL10Q9BUA6 226 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 TCP11L1Q9NUJ3 509 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
HNRNPC-220ENST00000555585 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 FAM196BA6NMK8 535 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 CPLX1O14810 134 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 DHX16O60231 1041 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 SLURP2P0DP57 97 aa11.29□□□□□ -0.6
HNRNPC-220ENST00000555585 SHMT1P34896 483 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms