RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DCP1AQ9NPI6 582 aaPredicted RBP7.42□□□□□ -1.22
SNX6-204ENST00000555541 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
SNX6-204ENST00000555541 CSADQ9Y600 493 aa7.42□□□□□ -1.22
SNX6-204ENST00000555541 TRIM37O94972 964 aa7.41□□□□□ -1.22
SNX6-204ENST00000555541 C12orf40Q86WS4 652 aa7.41□□□□□ -1.22
SNX6-204ENST00000555541 A0A0G2JLL6 359 aaPredicted RBP7.4□□□□□ -1.22
SNX6-204ENST00000555541 DCDC2CA8MYV0 355 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 FANCGO15287 622 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 TPTE2Q6XPS3 522 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 RELTQ969Z4 430 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 ALPK1Q96QP1 1244 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 ARID3AQ99856 593 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 CBX8Q9HC52 389 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
SNX6-204ENST00000555541 TCAF2A6NFQ2 919 aa7.39□□□□□ -1.23
SNX6-204ENST00000555541 PTPN11Q06124 597 aaPredicted RBP7.39□□□□□ -1.23
SNX6-204ENST00000555541 SP110Q9HB58 689 aa7.39□□□□□ -1.23
SNX6-204ENST00000555541 PARD6AQ9NPB6 346 aa7.39□□□□□ -1.23
SNX6-204ENST00000555541 FMR1Q06787 632 aaKnown RBP eCLIP7.38□□□□□ -1.23
SNX6-204ENST00000555541 INPP5AQ14642 412 aa7.38□□□□□ -1.23
SNX6-204ENST00000555541 THAP5Q7Z6K1 395 aa7.38□□□□□ -1.23
SNX6-204ENST00000555541 ABHD4Q8TB40 342 aa7.38□□□□□ -1.23
SNX6-204ENST00000555541 WWC3Q9ULE0 1092 aa7.38□□□□□ -1.23
SNX6-204ENST00000555541 NUAK1O60285 661 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 FBXO24O75426 580 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 LRIG2O94898 1065 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 GSTT1P30711 240 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 ERVFC1P60507 584 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 PDE4CQ08493 712 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 SCARA3Q6AZY7 606 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 MFSD4AQ8N468 514 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 ACSBG1Q96GR2 724 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 SLC26A8Q96RN1 970 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 BIN2Q9UBW5 565 aaPredicted RBP7.37□□□□□ -1.23
SNX6-204ENST00000555541 PPM1HQ9ULR3 514 aa7.37□□□□□ -1.23
SNX6-204ENST00000555541 DNAJC25-GNG10A0A024R161 153 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 H3BS24 57 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 HPXP02790 462 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 MAPK1P28482 360 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 SLBPQ14493 270 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNX6-204ENST00000555541 RALGPS1Q5JS13 557 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 CDKAL1Q5VV42 579 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 LLGL2Q6P1M3 1020 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 CCDC120Q96HB5 630 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 KCNC2Q96PR1 638 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 CEP44Q9C0F1 390 aa7.36□□□□□ -1.23
SNX6-204ENST00000555541 FOXD2O60548 495 aaPredicted RBP7.35□□□□□ -1.23
SNX6-204ENST00000555541 BRD1O95696 1058 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 CELA3AP09093 270 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 TTC6Q86TZ1 520 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 KCNN1Q92952 543 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 IRF2BPLQ9H1B7 796 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 FBRSQ9HAH7 460 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 CYP8B1Q9UNU6 501 aa7.35□□□□□ -1.23
SNX6-204ENST00000555541 FAM155AB1AL88 458 aaPredicted RBP7.34□□□□□ -1.23
SNX6-204ENST00000555541 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
SNX6-204ENST00000555541 ESR1P03372 595 aa7.34□□□□□ -1.23
SNX6-204ENST00000555541 CAP2P40123 477 aa7.34□□□□□ -1.23
SNX6-204ENST00000555541 FGD1P98174 961 aa7.34□□□□□ -1.23
SNX6-204ENST00000555541 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
SNX6-204ENST00000555541 LRFN4Q6PJG9 635 aa7.34□□□□□ -1.23
SNX6-204ENST00000555541 RIN3Q8TB24 985 aa7.34□□□□□ -1.23
SNX6-204ENST00000555541 GIPC1O14908 333 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 MAPK8P45983 427 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 LRRC14Q15048 493 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 KCT2Q8NC54 265 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 GAL3ST3Q96A11 431 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 SLAMF8Q9P0V8 285 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 SAMM50Q9Y512 469 aa7.33□□□□□ -1.24
SNX6-204ENST00000555541 CDK8P49336 464 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 NKG7Q16617 165 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 PCNX4Q63HM2 1172 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 BAHD1Q8TBE0 780 aaPredicted RBP7.32□□□□□ -1.24
SNX6-204ENST00000555541 ZNF507Q8TCN5 953 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 UBE2FQ969M7 185 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 ASB16Q96NS5 453 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 TMEM59LQ9UK28 342 aa7.32□□□□□ -1.24
SNX6-204ENST00000555541 MYOCOSA0A1B0GUC4 107 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 ALG1LQ6GMV1 187 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
SNX6-204ENST00000555541 MYLIPQ8WY64 445 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 PLPPR2Q96GM1 343 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 WNT10AQ9GZT5 417 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 MCOLN1Q9GZU1 580 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 C12orf49Q9H741 205 aa7.31□□□□□ -1.24
SNX6-204ENST00000555541 RAC2P15153 192 aa7.3□□□□□ -1.24
SNX6-204ENST00000555541 CDC37L1Q7L3B6 337 aa7.3□□□□□ -1.24
SNX6-204ENST00000555541 RNF32Q9H0A6 362 aa7.3□□□□□ -1.24
SNX6-204ENST00000555541 BMP7P18075 431 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 TRHRP34981 398 aaPredicted RBP7.29□□□□□ -1.24
SNX6-204ENST00000555541 DLG4P78352 724 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 NFKB2Q00653 900 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 TNK2Q07912 1038 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 MARCH10Q8NA82 808 aaPredicted RBP7.29□□□□□ -1.24
SNX6-204ENST00000555541 ELMO3Q96BJ8 720 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 MIPEPQ99797 713 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms