RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 NUCB1Q02818 461 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 NOM1Q5C9Z4 860 aaKnown RBP14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 GADL1Q6ZQY3 521 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 PRRT2Q7Z6L0 340 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 ANKRD23Q86SG2 305 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 CHD1LQ86WJ1 897 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 ABHD8Q96I13 439 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 STRBPQ96SI9 672 aaKnown RBP14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 SERPINB13Q9UIV8 391 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 SLC4A4Q9Y6R1 1079 aa14.96□□□□□ -0.01
TRAPPC6B-205ENST00000555269 DOCK2Q92608 1830 aa14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 TATDN1Q6P1N9 297 aa14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CTU1Q7Z7A3 348 aaKnown RBP14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ATP8A2Q9NTI2 1148 aa14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 MAST2Q6P0Q8 1798 aa14.95□□□□□ -0.02
TRAPPC6B-205ENST00000555269 USP17L12C9JPN9 530 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 USP17L21D6R901 530 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 M0R2C6 588 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ECM2O94769 699 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 GH2P01242 217 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CYP2C8P10632 490 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SHMT1P34896 483 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SP3Q02447 781 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 GABPAQ06546 454 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 FASTKD5Q7L8L6 764 aaKnown RBP14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 PLEKHM2Q8IWE5 1019 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CD99L2Q8TCZ2 262 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 APPBP2Q92624 585 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 FSD1Q9BTV5 496 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 EHD4Q9H223 541 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CPA4Q9UI42 421 aa14.94□□□□□ -0.02
TRAPPC6B-205ENST00000555269 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 TLR2O60603 784 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ZFYP08048 801 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ASNSP08243 561 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 HMGCS2P54868 508 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CERKLQ49MI3 558 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 TREML2Q5T2D2 321 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CTR9Q6PD62 1173 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ZCCHC17Q9NP64 241 aaKnown RBP14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ZBTB21Q9ULJ3 1066 aa14.93□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ABCB5Q2M3G0 1257 aa14.92□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ZMYM1Q5SVZ6 1142 aa14.92□□□□□ -0.02
TRAPPC6B-205ENST00000555269 C12orf60Q5U649 245 aa14.92□□□□□ -0.02
TRAPPC6B-205ENST00000555269 C17orf99Q6UX52 265 aa14.92□□□□□ -0.02
TRAPPC6B-205ENST00000555269 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CDK5RAP2Q96SN8 1893 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CCDC85CA6NKD9 419 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 GPAA1O43292 621 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 GUCY1A2P33402 732 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 BACE1P56817 501 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 MTMR2Q13614 643 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 RAB3GAP1Q15042 981 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 STK11IPQ8N1F8 1099 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 EVI5LQ96CN4 794 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ARHGAP39Q9C0H5 1083 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 TRIM17Q9Y577 477 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SIPA1L1O43166 1804 aa14.91□□□□□ -0.02
TRAPPC6B-205ENST00000555269 TRIM6-TRIM34B2RNG4 842 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 PATL2C9JE40 543 aaKnown RBP14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 APPP05067 770 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CDK8P49336 464 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SEPT2Q15019 361 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 LRRFIP1Q32MZ4 808 aaKnown RBP14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 SH3D19Q5HYK7 790 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 OTOP1Q7RTM1 612 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ACER1Q8TDN7 264 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 ERO1AQ96HE7 468 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 GINM1Q9NU53 330 aa14.9□□□□□ -0.02
TRAPPC6B-205ENST00000555269 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 USP17L10C9JJH3 530 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 PDE4AP27815 886 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 RILPL2Q969X0 211 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 TBC1D2Q9BYX2 928 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 EFCC1Q9HA90 598 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 EPB41L4AQ9HCS5 686 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 EMILIN3Q9NT22 766 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 AGTPBP1Q9UPW5 1226 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 MYH1P12882 1939 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 ADGRA2Q96PE1 1338 aa14.89□□□□□ -0.03
TRAPPC6B-205ENST00000555269 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 C19orf81C9J6K1 198 aa14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 CTGFP29279 349 aa14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 ZYXQ15942 572 aaKnown RBP14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 IFNL3Q8IZI9 196 aa14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 PROCA1Q8NCQ7 364 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 PARK7Q99497 189 aaKnown RBP14.88□□□□□ -0.03
TRAPPC6B-205ENST00000555269 OSBPL3Q9H4L5 887 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms