RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CCDC175P0C221 793 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 CHMP4BP1P59074 171 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 TRIM29Q14134 588 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 CCDC152Q4G0S7 254 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 BEND6Q5SZJ8 279 aaPredicted RBP12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 APOA5Q6Q788 366 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 TC2NQ8N9U0 490 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 CCDC34Q96HJ3 373 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 NACAP1Q9BZK3 213 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 NAPBQ9H115 298 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 MYH8P13535 1937 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 NID2Q14112 1375 aa12.18□□□□□ -0.46
MTHFD1-210ENST00000555252 MROH7-TTC4A0A0A0MT08 1334 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 CUTAO60888 179 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 IGHMBP2P38935 993 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 MAGEA9P43362 315 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 SUSD4Q5VX71 490 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 RESP18Q5W5W9 173 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 OTUD7BQ6GQQ9 843 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 NFXL1Q6ZNB6 911 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 FAM71BQ8TC56 605 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 MED4Q9NPJ6 270 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 CDC23Q9UJX2 597 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 TIAM2Q8IVF5 1701 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 INTS5Q6P9B9 1019 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 MLKLQ8NB16 471 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 ENOX1Q8TC92 643 aaKnown RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 CCDC12Q8WUD4 166 aaPredicted RBP12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 DHX58Q96C10 678 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 TRERF1Q96PN7 1200 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 RREB1Q92766 1687 aa12.17□□□□□ -0.46
MTHFD1-210ENST00000555252 DOCK2Q92608 1830 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 CHD4Q14839 1912 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 GOLGA8AA7E2F4 631 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 B4E1Z4 1266 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 H3BQF6 201 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 PPFIA3O75145 1194 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 ZNF18P17022 549 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 RCAN1P53805 252 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 KRT40Q6A162 431 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 MAGEB6Q8N7X4 407 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 INTS13Q9NVM9 706 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 MYO1AQ9UBC5 1043 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 L1RE1Q9UN81 338 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 COL16A1Q07092 1604 aaPredicted RBP12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 MYO5AQ9Y4I1 1855 aaKnown RBP12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
MTHFD1-210ENST00000555252 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 WDHD1O75717 1129 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 MBD4O95243 580 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 SART3Q15020 963 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 AKNAD1Q5T1N1 836 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 FBXO41Q8TF61 875 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 VIPAS39Q9H9C1 493 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 FANCLQ9NW38 375 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 IFIT3O14879 490 aaKnown RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 KIF5CO60282 957 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 CAMTA2O94983 1202 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 PTPAQ15257 358 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 NTRK3Q16288 839 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 ICE2Q659A1 982 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 MFSD6Q6ZSS7 791 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 VPS37DQ86XT2 251 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 HELBQ8NG08 1087 aaPredicted RBP12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.46
MTHFD1-210ENST00000555252 LAMB2P55268 1798 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 IFNAR1P17181 557 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 MCM3P25205 808 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
MTHFD1-210ENST00000555252 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms