RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 MYO1FO00160 1098 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 FOXP2O15409 715 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 CABP4P57796 275 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 WHAMMP3Q1A5X7 153 aa17.72■□□□□ 0.43
SYNE3-203ENST00000554873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
SYNE3-203ENST00000554873 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
SYNE3-203ENST00000554873 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
SYNE3-203ENST00000554873 SPTLC2O15270 562 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 PPFIA1Q13136 1202 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 WLSQ5T9L3 541 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 KCNG4Q8TDN1 519 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 POLR3EQ9NVU0 708 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.43
SYNE3-203ENST00000554873 CSB-PGBD3P0DP91 1061 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 FKBP4Q02790 459 aaKnown RBP eCLIP17.71■□□□□ 0.43
SYNE3-203ENST00000554873 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.43
SYNE3-203ENST00000554873 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 TMEM94Q12767 1356 aa17.71■□□□□ 0.43
SYNE3-203ENST00000554873 CTAGE9A4FU28 777 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 EIF3HO15372 352 aaKnown RBP eCLIP17.71■□□□□ 0.42
SYNE3-203ENST00000554873 ZNF202O95125 648 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 YEATS4O95619 227 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 B4GALNT4Q76KP1 1039 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 SLC24A3Q9HC58 644 aa17.71■□□□□ 0.42
SYNE3-203ENST00000554873 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
SYNE3-203ENST00000554873 KIAA0754O94854 1291 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 PTPN21Q16825 1174 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 LZTFL1Q9NQ48 299 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 INTS13Q9NVM9 706 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 KLF18A0A0U1RQI7 1052 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 PRC1O43663 620 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 FGAP02671 866 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 MCM3P25205 808 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 STIM1Q13586 685 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 SPATS2Q86XZ4 545 aaKnown RBP17.7■□□□□ 0.42
SYNE3-203ENST00000554873 OTUD6BQ8N6M0 293 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 CAPS2Q9BXY5 557 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
SYNE3-203ENST00000554873 KIF28PB7ZC32 967 aa17.69■□□□□ 0.42
SYNE3-203ENST00000554873 ADKP55263 362 aaKnown RBP17.69■□□□□ 0.42
SYNE3-203ENST00000554873 GOLGA6CA6NDK9 693 aa17.69■□□□□ 0.42
SYNE3-203ENST00000554873 GOLGA6DP0CG33 693 aa17.69■□□□□ 0.42
SYNE3-203ENST00000554873 WASHC4Q2M389 1173 aa17.69■□□□□ 0.42
SYNE3-203ENST00000554873 ZNF569Q5MCW4 686 aa17.69■□□□□ 0.42
SYNE3-203ENST00000554873 GOLGA6AQ9NYA3 693 aa17.69■□□□□ 0.42
SYNE3-203ENST00000554873 IMMTQ16891 758 aaKnown RBP17.68■□□□□ 0.42
SYNE3-203ENST00000554873 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
SYNE3-203ENST00000554873 MB21D2Q8IYB1 491 aaPredicted RBP17.68■□□□□ 0.42
SYNE3-203ENST00000554873 COG1Q8WTW3 980 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 RIN2Q8WYP3 895 aaPredicted RBP17.68■□□□□ 0.42
SYNE3-203ENST00000554873 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 GGCXP38435 758 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 ARHGAP25P42331 645 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 INHBEP58166 350 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 ANTXR2P58335 489 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 SYNE3Q6ZMZ3 975 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 FAM43BQ6ZT52 329 aaPredicted RBP17.68■□□□□ 0.42
SYNE3-203ENST00000554873 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 CCDC148Q8NFR7 591 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.68■□□□□ 0.42
SYNE3-203ENST00000554873 GRIN2DO15399 1336 aa17.68■□□□□ 0.42
SYNE3-203ENST00000554873 CIAO1O76071 339 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 ADORA1P30542 326 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 ANO1Q5XXA6 986 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 NOA1Q8NC60 698 aaKnown RBP17.67■□□□□ 0.42
SYNE3-203ENST00000554873 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
SYNE3-203ENST00000554873 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 A1BGP04217 495 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 ZKSCAN8Q15776 578 aaPredicted RBP17.67■□□□□ 0.42
SYNE3-203ENST00000554873 CRACR2AQ9BSW2 395 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 BSDC1Q9NW68 430 aaPredicted RBP17.67■□□□□ 0.42
SYNE3-203ENST00000554873 ADGRG1Q9Y653 693 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
SYNE3-203ENST00000554873 RTN2O75298 545 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 PFKFB1P16118 471 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 CMA1P23946 247 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 MTF1Q14872 753 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 CHRNA2Q15822 529 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 KLC4Q9NSK0 619 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 TUBE1Q9UJT0 475 aa17.67■□□□□ 0.42
SYNE3-203ENST00000554873 CPLX1O14810 134 aa17.66■□□□□ 0.42
SYNE3-203ENST00000554873 SSR1P43307 286 aaKnown RBP17.66■□□□□ 0.42
SYNE3-203ENST00000554873 GNGT1P63211 74 aa17.66■□□□□ 0.42
SYNE3-203ENST00000554873 KIF23Q02241 960 aaPredicted RBP17.66■□□□□ 0.42
SYNE3-203ENST00000554873 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
SYNE3-203ENST00000554873 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
SYNE3-203ENST00000554873 EHD4Q9H223 541 aa17.66■□□□□ 0.42
SYNE3-203ENST00000554873 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
SYNE3-203ENST00000554873 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
SYNE3-203ENST00000554873 NAPGQ99747 312 aaPredicted RBP17.66■□□□□ 0.42
SYNE3-203ENST00000554873 SAMM50Q9Y512 469 aa17.66■□□□□ 0.42
SYNE3-203ENST00000554873 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms