RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 CYP2C8P10632 490 aa14.95□□□□□ -0.02
SHMT2-214ENST00000554604 RRP1BQ14684 758 aaKnown RBP14.95□□□□□ -0.02
SHMT2-214ENST00000554604 C17orf99Q6UX52 265 aa14.95□□□□□ -0.02
SHMT2-214ENST00000554604 TTC6Q86TZ1 520 aa14.95□□□□□ -0.02
SHMT2-214ENST00000554604 METTL16Q86W50 562 aaKnown RBP14.95□□□□□ -0.02
SHMT2-214ENST00000554604 SMCR8Q8TEV9 937 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-214ENST00000554604 RIOK1Q9BRS2 568 aaKnown RBP14.95□□□□□ -0.02
SHMT2-214ENST00000554604 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-214ENST00000554604 LOC285556D6RIA3 1793 aa14.95□□□□□ -0.02
SHMT2-214ENST00000554604 GDF11O95390 407 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 POLR3DP05423 398 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-214ENST00000554604 CAP1Q01518 475 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 ANKRD45Q5TZF3 282 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-214ENST00000554604 LNPKQ9C0E8 428 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 DNAJC18Q9H819 358 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 ECHDC1Q9NTX5 307 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 SERPINB13Q9UIV8 391 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 AGTPBP1Q9UPW5 1226 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 SLC45A1Q9Y2W3 748 aa14.94□□□□□ -0.02
SHMT2-214ENST00000554604 DOCK3Q8IZD9 2030 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 TCRBV5S4A2TA0A5A2 114 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 FMNL1O95466 1100 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-214ENST00000554604 GNRH1P01148 92 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 ADD2P35612 726 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 PSMC4P43686 418 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 HMGCS2P54868 508 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 ZSCAN25Q6NSZ9 544 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 ANP32EQ9BTT0 268 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 ARHGAP39Q9C0H5 1083 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 EHD4Q9H223 541 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 GINM1Q9NU53 330 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 PNMA3Q9UL41 463 aa14.93□□□□□ -0.02
SHMT2-214ENST00000554604 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
SHMT2-214ENST00000554604 HOXD10P28358 340 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHMT2-214ENST00000554604 SLC9C1Q4G0N8 1177 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 NBPF11Q86T75 865 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 LCORLQ8N3X6 602 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 ARMT1Q9H993 441 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 MCM9Q9NXL9 1143 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 ZBTB21Q9ULJ3 1066 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 PTCH2Q9Y6C5 1203 aa14.92□□□□□ -0.02
SHMT2-214ENST00000554604 TNRC18O15417 2968 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-214ENST00000554604 MBD4O95243 580 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 GH2P01242 217 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 BCRP11274 1271 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 BACE1P56817 501 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 MTMR2Q13614 643 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 SLFNL1Q499Z3 407 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 TREML2Q5T2D2 321 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 TRIM47Q96LD4 638 aa14.91□□□□□ -0.02
SHMT2-214ENST00000554604 C19orf81C9J6K1 198 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 USP17L10C9JJH3 530 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 OSBPP22059 807 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 PLCD1P51178 756 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 PRMT2P55345 433 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 JAG1P78504 1218 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 UBE3CQ15386 1083 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 SHROOM1Q2M3G4 852 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-214ENST00000554604 CERKLQ49MI3 558 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-214ENST00000554604 SH3D19Q5HYK7 790 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 TSHZ3Q63HK5 1081 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 TATDN1Q6P1N9 297 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 UPF2Q9HAU5 1272 aaKnown RBP14.9□□□□□ -0.02
SHMT2-214ENST00000554604 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
SHMT2-214ENST00000554604 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-214ENST00000554604 RBBP6Q7Z6E9 1792 aaKnown RBP14.89□□□□□ -0.03
SHMT2-214ENST00000554604 FCGRTP55899 365 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 IRX3P78415 501 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-214ENST00000554604 RAB3GAP1Q15042 981 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 ABCB5Q2M3G0 1257 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 AMOTL1Q8IY63 956 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 ARMC5Q96C12 935 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 FEZ1Q99689 392 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 ATP8A2Q9NTI2 1148 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 SRRDQ9UH36 339 aa14.89□□□□□ -0.03
SHMT2-214ENST00000554604 ERC2O15083 957 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 PRKAB2O43741 272 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 SEC24BO95487 1268 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 CTGFP29279 349 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 GCLCP48506 637 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-214ENST00000554604 ANKRD13CQ8N6S4 541 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 KBTBD3Q8NAB2 608 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 RAET1EQ8TD07 263 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 TMEM106CQ9BVX2 250 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-214ENST00000554604 TTC41PQ6P2S7 1318 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 MYPNQ86TC9 1320 aa14.88□□□□□ -0.03
SHMT2-214ENST00000554604 MPHOSPH10O00566 681 aaKnown RBP14.87□□□□□ -0.03
SHMT2-214ENST00000554604 CHGBP05060 677 aa14.87□□□□□ -0.03
SHMT2-214ENST00000554604 SHMT1P34896 483 aa14.87□□□□□ -0.03
SHMT2-214ENST00000554604 LRRFIP1Q32MZ4 808 aaKnown RBP14.87□□□□□ -0.03
SHMT2-214ENST00000554604 ZNF333Q96JL9 665 aa14.87□□□□□ -0.03
SHMT2-214ENST00000554604 SLC4A4Q9Y6R1 1079 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms