RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ARHGEF12Q9NZN5 1544 aa6.33□□□□□ -1.4
ATXN3-227ENST00000554491 BIN1O00499 593 aa6.32□□□□□ -1.4
ATXN3-227ENST00000554491 CEACAM5P06731 702 aa6.32□□□□□ -1.4
ATXN3-227ENST00000554491 ITIH2P19823 946 aa6.32□□□□□ -1.4
ATXN3-227ENST00000554491 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-227ENST00000554491 NPM2Q86SE8 214 aaKnown RBP6.32□□□□□ -1.4
ATXN3-227ENST00000554491 ATG4DQ86TL0 474 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-227ENST00000554491 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-227ENST00000554491 LRRN4CLQ8ND94 238 aa6.32□□□□□ -1.4
ATXN3-227ENST00000554491 GPBAR1Q8TDU6 330 aa6.32□□□□□ -1.4
ATXN3-227ENST00000554491 HEXIM2Q96MH2 286 aaKnown RBP6.32□□□□□ -1.4
ATXN3-227ENST00000554491 SSU72Q9NP77 194 aaKnown RBP6.32□□□□□ -1.4
ATXN3-227ENST00000554491 SOWAHDA6NJG2 315 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 ZNF124Q15973 351 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 ARHGAP27Q6ZUM4 889 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 UBE3DQ7Z6J8 389 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 RNF214Q8ND24 703 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 PI4K2BQ8TCG2 481 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 FAM168AQ92567 244 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 HRASLS5Q96KN8 279 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 ARID3AQ99856 593 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 PPP4R2Q9NY27 417 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 UHRF1BP1Q6BDS2 1440 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 AKNAQ7Z591 1439 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 KIF27Q86VH2 1401 aa6.31□□□□□ -1.4
ATXN3-227ENST00000554491 SETD1BQ9UPS6 1966 aaKnown RBP6.31□□□□□ -1.4
ATXN3-227ENST00000554491 PNMA6FA0A0J9YX94 578 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 RAPGEF3O95398 923 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
ATXN3-227ENST00000554491 NME2P22392 152 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 NTF4P34130 210 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 ERVK-24P63145 666 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 TAF7LQ5H9L4 462 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 PPM1JQ5JR12 505 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 FAM214BQ7L5A3 538 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 CCER1Q8TC90 406 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-227ENST00000554491 GRIN3AQ8TCU5 1115 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 CBX8Q9HC52 389 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 PRDM7Q9NQW5 492 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 CSADQ9Y600 493 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 C3P01024 1663 aa6.3□□□□□ -1.4
ATXN3-227ENST00000554491 TMEM265A0A087WTH1 108 aa6.29□□□□□ -1.4
ATXN3-227ENST00000554491 PAGE1O75459 146 aa6.29□□□□□ -1.4
ATXN3-227ENST00000554491 HNRNPUQ00839 825 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATXN3-227ENST00000554491 DSC3Q14574 896 aa6.29□□□□□ -1.4
ATXN3-227ENST00000554491 ACSBG1Q96GR2 724 aa6.29□□□□□ -1.4
ATXN3-227ENST00000554491 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
ATXN3-227ENST00000554491 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
ATXN3-227ENST00000554491 FHOD3Q2V2M9 1422 aa6.28□□□□□ -1.4
ATXN3-227ENST00000554491 ZEB1P37275 1124 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-227ENST00000554491 ENOX2Q16206 610 aaKnown RBP6.28□□□□□ -1.4
ATXN3-227ENST00000554491 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
ATXN3-227ENST00000554491 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-227ENST00000554491 BIN2Q9UBW5 565 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-227ENST00000554491 CARMIL1Q5VZK9 1371 aa6.28□□□□□ -1.4
ATXN3-227ENST00000554491 DENND4BO75064 1496 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-227ENST00000554491 NCOA1Q15788 1441 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 DCDC2CA8MYV0 355 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 ENC1O14682 589 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 TREHO43280 583 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 FBXO24O75426 580 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 BMP6P22004 513 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 RASIP1Q5U651 963 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
ATXN3-227ENST00000554491 C12orf40Q86WS4 652 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 SETDB2Q96T68 719 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 EMILIN2Q9BXX0 1053 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 PRDM10Q9NQV6 1147 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 DCTN4Q9UJW0 460 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 HECW1Q76N89 1606 aa6.27□□□□□ -1.41
ATXN3-227ENST00000554491 SETD1AO15047 1707 aaKnown RBP6.26□□□□□ -1.41
ATXN3-227ENST00000554491 SUPT6HQ7KZ85 1726 aaKnown RBP6.26□□□□□ -1.41
ATXN3-227ENST00000554491 PLCB3Q01970 1234 aa6.26□□□□□ -1.41
ATXN3-227ENST00000554491 SLC23A3Q6PIS1 610 aa6.26□□□□□ -1.41
ATXN3-227ENST00000554491 MAGI2Q86UL8 1455 aa6.26□□□□□ -1.41
ATXN3-227ENST00000554491 FARP2O94887 1054 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-227ENST00000554491 FGD1P98174 961 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 RING1Q06587 406 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 IKZF1Q13422 519 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 NKPD1Q17RQ9 610 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 ZBTB37Q5TC79 503 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 TMEM40Q8WWA1 233 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 OSBPL7Q9BZF2 842 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATXN3-227ENST00000554491 GOLGA3Q08378 1498 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 ZNF142P52746 1687 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-227ENST00000554491 CAMSAP1Q5T5Y3 1602 aa6.25□□□□□ -1.41
ATXN3-227ENST00000554491 SUPT5HO00267 1087 aaKnown RBP6.24□□□□□ -1.41
ATXN3-227ENST00000554491 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-227ENST00000554491 MAPK1P28482 360 aa6.24□□□□□ -1.41
ATXN3-227ENST00000554491 LCE4AQ5TA78 99 aa6.24□□□□□ -1.41
ATXN3-227ENST00000554491 FLAD1Q8NFF5 587 aa6.24□□□□□ -1.41
ATXN3-227ENST00000554491 PICK1Q9NRD5 415 aa6.24□□□□□ -1.41
ATXN3-227ENST00000554491 GTF2IRD1Q9UHL9 959 aa6.24□□□□□ -1.41
ATXN3-227ENST00000554491 SNX11Q9Y5W9 270 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms