RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 MOGSQ13724 837 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 TAF1CQ15572 869 aaPredicted RBP9.12□□□□□ -0.95
LINC00640-201ENST00000554409 PRRT2Q7Z6L0 340 aaPredicted RBP9.12□□□□□ -0.95
LINC00640-201ENST00000554409 FOXP4Q8IVH2 680 aaPredicted RBP9.12□□□□□ -0.95
LINC00640-201ENST00000554409 MIGA1Q8NAN2 632 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 EDC3Q96F86 508 aaKnown RBP9.12□□□□□ -0.95
LINC00640-201ENST00000554409 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC00640-201ENST00000554409 EHD4Q9H223 541 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 DNAJC18Q9H819 358 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 ZFYVE28Q9HCC9 887 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 ECHDC1Q9NTX5 307 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 GINM1Q9NU53 330 aa9.12□□□□□ -0.95
LINC00640-201ENST00000554409 ZNF532Q9HCE3 1301 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 TLR2O60603 784 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 HLA-DOAP06340 250 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 ADD2P35612 726 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 CAP2P40123 477 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 USP5P45974 858 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
LINC00640-201ENST00000554409 HDAC1Q13547 482 aaPredicted RBP9.11□□□□□ -0.95
LINC00640-201ENST00000554409 UBE3CQ15386 1083 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 PALD1Q9ULE6 856 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 SLC45A1Q9Y2W3 748 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 ZHX2Q9Y6X8 837 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 MYH8P13535 1937 aa9.11□□□□□ -0.95
LINC00640-201ENST00000554409 TTC41PQ6P2S7 1318 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 ADGRA2Q96PE1 1338 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 PDHXO00330 501 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 SP3Q02447 781 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 RRP1BQ14684 758 aaKnown RBP9.1□□□□□ -0.95
LINC00640-201ENST00000554409 ZSCAN25Q6NSZ9 544 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 TATDN1Q6P1N9 297 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 FASTKD5Q7L8L6 764 aaKnown RBP9.1□□□□□ -0.95
LINC00640-201ENST00000554409 TTC6Q86TZ1 520 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 CRACR2BQ8N4Y2 399 aaPredicted RBP9.1□□□□□ -0.95
LINC00640-201ENST00000554409 EFCAB3Q8N7B9 438 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 GCC1Q96CN9 775 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
LINC00640-201ENST00000554409 BCL11AQ9H165 835 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 SAP30BPQ9UHR5 308 aaKnown RBP9.1□□□□□ -0.95
LINC00640-201ENST00000554409 COLQQ9Y215 455 aaPredicted RBP9.1□□□□□ -0.95
LINC00640-201ENST00000554409 MGAMO43451 1857 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 ZSWIM8A7E2V4 1837 aa9.1□□□□□ -0.95
LINC00640-201ENST00000554409 BAZ2AQ9UIF9 1905 aaKnown RBP9.09□□□□□ -0.95
LINC00640-201ENST00000554409 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 USP17L5A8MUK1 530 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 ASNSP08243 561 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 SH3D19Q5HYK7 790 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 GPAT2Q6NUI2 795 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 FBXO46Q6PJ61 603 aaPredicted RBP9.09□□□□□ -0.95
LINC00640-201ENST00000554409 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 OTOP1Q7RTM1 612 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 LCORLQ8N3X6 602 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 KBTBD3Q8NAB2 608 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 PROCA1Q8NCQ7 364 aaPredicted RBP9.09□□□□□ -0.95
LINC00640-201ENST00000554409 ZNF280CQ8ND82 737 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 PARK7Q99497 189 aaKnown RBP9.09□□□□□ -0.95
LINC00640-201ENST00000554409 WDR18Q9BV38 432 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 TRIM34Q9BYJ4 488 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 AS3MTQ9HBK9 375 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.09□□□□□ -0.95
LINC00640-201ENST00000554409 SERPINB13Q9UIV8 391 aa9.09□□□□□ -0.95
LINC00640-201ENST00000554409 RBBP6Q7Z6E9 1792 aaKnown RBP9.09□□□□□ -0.95
LINC00640-201ENST00000554409 TRIM75PA6NK02 468 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 ERC2O15083 957 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 MBD4O95243 580 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 GABPAQ06546 454 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 ARHGEF6Q15052 776 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 C17orf99Q6UX52 265 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
LINC00640-201ENST00000554409 PI4K2BQ8TCG2 481 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 CD99L2Q8TCZ2 262 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 ARMT1Q9H993 441 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
LINC00640-201ENST00000554409 ATP8A2Q9NTI2 1148 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 AGTPBP1Q9UPW5 1226 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 HPS5Q9UPZ3 1129 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 TRIM17Q9Y577 477 aa9.08□□□□□ -0.96
LINC00640-201ENST00000554409 POTEFA5A3E0 1075 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 CCDC85CA6NKD9 419 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 GLRX3O76003 335 aaKnown RBP9.07□□□□□ -0.96
LINC00640-201ENST00000554409 GDF11O95390 407 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 GNRH1P01148 92 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 POLR3DP05423 398 aaPredicted RBP9.07□□□□□ -0.96
LINC00640-201ENST00000554409 ZFYP08048 801 aaPredicted RBP9.07□□□□□ -0.96
LINC00640-201ENST00000554409 MX1P20591 662 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 SHMT1P34896 483 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 PLCD1P51178 756 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 JAG1P78504 1218 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 LACTBP83111 547 aaPredicted RBP9.07□□□□□ -0.96
LINC00640-201ENST00000554409 CAP1Q01518 475 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 SPP2Q13103 211 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 SLC4A8Q2Y0W8 1093 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 SLFNL1Q499Z3 407 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 TSHZ3Q63HK5 1081 aa9.07□□□□□ -0.96
LINC00640-201ENST00000554409 GADL1Q6ZQY3 521 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms