RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ARMC5Q96C12 935 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 ATG4CQ96DT6 458 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 KRTAP9-9Q9BYP9 154 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 KRTAP9-4Q9BYQ2 154 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 ATXN3LQ9H3M9 355 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 PIF1Q9H611 641 aa7.91□□□□□ -1.14
CHD8-207ENST00000554384 C9orf172C9J069 976 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 DYNC1LI2O43237 492 aaPredicted RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 SART1O43290 800 aaKnown RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 ACRP10323 421 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 PDE4BQ07343 736 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 SLBPQ14493 270 aaKnown RBP eCLIP7.9□□□□□ -1.14
CHD8-207ENST00000554384 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 SGO2Q562F6 1265 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 TMEM201Q5SNT2 666 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 Q6ZS46 218 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 CKAP2LQ8IYA6 745 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 RBBP8NLQ8NC74 664 aaPredicted RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 ZNF507Q8TCN5 953 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 MICAL1Q8TDZ2 1067 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 XAGE3Q8WTP9 111 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 FBLIM1Q8WUP2 373 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 TMEM40Q8WWA1 233 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 HIRIP3Q9BW71 556 aaPredicted RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 GSX1Q9H4S2 264 aaPredicted RBP7.9□□□□□ -1.14
CHD8-207ENST00000554384 PIDD1Q9HB75 910 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 ST7Q9NRC1 585 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 TACC3Q9Y6A5 838 aa7.9□□□□□ -1.14
CHD8-207ENST00000554384 IMPDH2P12268 514 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 HNRNPUQ00839 825 aaKnown RBP eCLIP7.89□□□□□ -1.15
CHD8-207ENST00000554384 ADGRE1Q14246 886 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 HID1Q8IV36 788 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 SMYD4Q8IYR2 804 aaPredicted RBP7.89□□□□□ -1.15
CHD8-207ENST00000554384 FAM13CQ8NE31 585 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 SSU72Q9NP77 194 aaKnown RBP7.89□□□□□ -1.15
CHD8-207ENST00000554384 GMIPQ9P107 970 aa7.89□□□□□ -1.15
CHD8-207ENST00000554384 NFICP08651 508 aa7.88□□□□□ -1.15
CHD8-207ENST00000554384 USP11P51784 963 aa7.88□□□□□ -1.15
CHD8-207ENST00000554384 NRG1Q02297 640 aaPredicted RBP7.88□□□□□ -1.15
CHD8-207ENST00000554384 CDC37L1Q7L3B6 337 aa7.88□□□□□ -1.15
CHD8-207ENST00000554384 MCATQ8IVS2 390 aaKnown RBP7.88□□□□□ -1.15
CHD8-207ENST00000554384 FAM46AQ96IP4 442 aaKnown RBP7.88□□□□□ -1.15
CHD8-207ENST00000554384 ADAM30Q9UKF2 790 aa7.88□□□□□ -1.15
CHD8-207ENST00000554384 DAGLAQ9Y4D2 1042 aa7.88□□□□□ -1.15
CHD8-207ENST00000554384 A0A1W2PQH9 124 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 MEIS3P2A8K0S8 358 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
CHD8-207ENST00000554384 NME1P15531 152 aaKnown RBP7.87□□□□□ -1.15
CHD8-207ENST00000554384 RAB33AQ14088 237 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 BMS1Q14692 1282 aaKnown RBP7.87□□□□□ -1.15
CHD8-207ENST00000554384 PRAMEF13Q5VWM6 474 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 NLRC3Q7RTR2 1065 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 TTC6Q86TZ1 520 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHD8-207ENST00000554384 ARMC10Q8N2F6 343 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 KIF2CQ99661 725 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 ACSS3Q9H6R3 686 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 CNNM2Q9H8M5 875 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 PCDHB10Q9UN67 800 aa7.87□□□□□ -1.15
CHD8-207ENST00000554384 LTBP3Q9NS15 1303 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 KRTAP4-8A0A0G2JLE6 195 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 CCDC85CA6NKD9 419 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 B2RBV5 119 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 BMP3P12645 472 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 SERINC3Q13530 473 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
CHD8-207ENST00000554384 PRSS36Q5K4E3 855 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 LARP1BQ659C4 914 aaKnown RBP7.86□□□□□ -1.15
CHD8-207ENST00000554384 UNC5AQ6ZN44 842 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 BAHD1Q8TBE0 780 aaPredicted RBP7.86□□□□□ -1.15
CHD8-207ENST00000554384 NACC1Q96RE7 527 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 CEP41Q9BYV8 373 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 OSBPL2Q9H1P3 480 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 SEMA6CQ9H3T2 930 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 ACTR10Q9NZ32 417 aa7.86□□□□□ -1.15
CHD8-207ENST00000554384 SCO2A0A1W2PP80 73 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 BTBD11A6QL63 1104 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 GUCY2CP25092 1073 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 RXRBP28702 533 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 MLECQ14165 292 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 CDCP2Q5VXM1 449 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 SLC6A19Q695T7 634 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 GIMAP6Q6P9H5 292 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 ARMCX6Q7L4S7 300 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 TXNRD3Q86VQ6 643 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 MRPL41Q8IXM3 137 aaKnown RBP7.85□□□□□ -1.15
CHD8-207ENST00000554384 DZIP1LQ8IYY4 767 aaKnown RBP7.85□□□□□ -1.15
CHD8-207ENST00000554384 OR6P1Q8NGX9 317 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 UTP4Q969X6 686 aaKnown RBP7.85□□□□□ -1.15
CHD8-207ENST00000554384 TM9SF2Q99805 663 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 TRIM55Q9BYV6 548 aa7.85□□□□□ -1.15
CHD8-207ENST00000554384 R3HCC1Q9Y3T6 440 aaKnown RBP7.85□□□□□ -1.15
CHD8-207ENST00000554384 FAM221BA6H8Z2 402 aa7.84□□□□□ -1.15
CHD8-207ENST00000554384 RAG1P15918 1043 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms