RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TTF1Q15361 905 aaPredicted RBP22.83■■□□□ 1.25
CPSF2-203ENST00000554290 CLASRPQ8N2M8 674 aaKnown RBP22.83■■□□□ 1.25
CPSF2-203ENST00000554290 ANTXR1Q9H6X2 564 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 IL1RAPL2Q9NP60 686 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 PCDH10Q9P2E7 1040 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 TAOK2Q9UL54 1235 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 MGAMO43451 1857 aa22.82■■□□□ 1.24
CPSF2-203ENST00000554290 JAG1P78504 1218 aa22.82■■□□□ 1.24
CPSF2-203ENST00000554290 HABP4Q5JVS0 413 aaKnown RBP22.82■■□□□ 1.24
CPSF2-203ENST00000554290 KIF1BPQ96EK5 621 aa22.82■■□□□ 1.24
CPSF2-203ENST00000554290 UNC93B1Q9H1C4 597 aa22.82■■□□□ 1.24
CPSF2-203ENST00000554290 CHMP4BQ9H444 224 aaKnown RBP22.82■■□□□ 1.24
CPSF2-203ENST00000554290 ZBTB21Q9ULJ3 1066 aa22.82■■□□□ 1.24
CPSF2-203ENST00000554290 ATAD5Q96QE3 1844 aa22.81■■□□□ 1.24
CPSF2-203ENST00000554290 INHAP05111 366 aa22.81■■□□□ 1.24
CPSF2-203ENST00000554290 CAPN2P17655 700 aa22.81■■□□□ 1.24
CPSF2-203ENST00000554290 HOXA7P31268 230 aaPredicted RBP22.81■■□□□ 1.24
CPSF2-203ENST00000554290 TTC6Q86TZ1 520 aa22.81■■□□□ 1.24
CPSF2-203ENST00000554290 U2AF1L4Q8WU68 220 aaKnown RBP22.81■■□□□ 1.24
CPSF2-203ENST00000554290 LOC285556D6RIA3 1793 aa22.81■■□□□ 1.24
CPSF2-203ENST00000554290 APBB1O00213 710 aa22.8■■□□□ 1.24
CPSF2-203ENST00000554290 MORF4L1Q9UBU8 362 aa22.8■■□□□ 1.24
CPSF2-203ENST00000554290 SERPINB13Q9UIV8 391 aa22.8■■□□□ 1.24
CPSF2-203ENST00000554290 COG6Q9Y2V7 657 aa22.8■■□□□ 1.24
CPSF2-203ENST00000554290 MKI67P46013 3256 aaKnown RBP22.79■■□□□ 1.24
CPSF2-203ENST00000554290 SGPL1O95470 568 aa22.79■■□□□ 1.24
CPSF2-203ENST00000554290 IFIT2P09913 472 aaKnown RBP22.79■■□□□ 1.24
CPSF2-203ENST00000554290 DPF3Q92784 378 aa22.79■■□□□ 1.24
CPSF2-203ENST00000554290 HTATIP2Q9BUP3 242 aa22.79■■□□□ 1.24
CPSF2-203ENST00000554290 EHD4Q9H223 541 aa22.79■■□□□ 1.24
CPSF2-203ENST00000554290 ZBTB40Q9NUA8 1239 aa22.79■■□□□ 1.24
CPSF2-203ENST00000554290 SIPA1L1O43166 1804 aa22.79■■□□□ 1.24
CPSF2-203ENST00000554290 FOCADQ5VW36 1801 aa22.78■■□□□ 1.24
CPSF2-203ENST00000554290 MAGEB6P1A0A0J9YX57 407 aa22.78■■□□□ 1.24
CPSF2-203ENST00000554290 GH2P01242 217 aa22.78■■□□□ 1.24
CPSF2-203ENST00000554290 SHROOM1Q2M3G4 852 aaPredicted RBP22.78■■□□□ 1.24
CPSF2-203ENST00000554290 SLC9C2Q5TAH2 1124 aa22.78■■□□□ 1.24
CPSF2-203ENST00000554290 TATDN1Q6P1N9 297 aa22.78■■□□□ 1.24
CPSF2-203ENST00000554290 P2RX7Q99572 595 aaKnown RBP22.78■■□□□ 1.24
CPSF2-203ENST00000554290 MYO5AQ9Y4I1 1855 aaKnown RBP22.78■■□□□ 1.24
CPSF2-203ENST00000554290 RAB11FIP3O75154 756 aa22.77■■□□□ 1.24
CPSF2-203ENST00000554290 HERVK_113P62684 666 aa22.77■■□□□ 1.24
CPSF2-203ENST00000554290 USP17L2Q6R6M4 530 aa22.77■■□□□ 1.24
CPSF2-203ENST00000554290 UBE2Q1Q7Z7E8 422 aa22.77■■□□□ 1.24
CPSF2-203ENST00000554290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.77■■□□□ 1.24
CPSF2-203ENST00000554290 CDK5RAP2Q96SN8 1893 aa22.77■■□□□ 1.24
CPSF2-203ENST00000554290 H0YGN5 161 aa22.76■■□□□ 1.23
CPSF2-203ENST00000554290 FARP2O94887 1054 aaPredicted RBP22.76■■□□□ 1.23
CPSF2-203ENST00000554290 TFRCP02786 760 aaKnown RBP22.76■■□□□ 1.23
CPSF2-203ENST00000554290 CERKLQ49MI3 558 aaPredicted RBP22.76■■□□□ 1.23
CPSF2-203ENST00000554290 GPRC5AQ8NFJ5 357 aa22.76■■□□□ 1.23
CPSF2-203ENST00000554290 GTF3C2Q8WUA4 911 aaPredicted RBP22.76■■□□□ 1.23
CPSF2-203ENST00000554290 DEFB118Q96PH6 123 aa22.76■■□□□ 1.23
CPSF2-203ENST00000554290 RIOK1Q9BRS2 568 aaKnown RBP22.76■■□□□ 1.23
CPSF2-203ENST00000554290 CRNKL1Q9BZJ0 848 aaKnown RBP22.76■■□□□ 1.23
CPSF2-203ENST00000554290 RCAN3Q9UKA8 241 aa22.76■■□□□ 1.23
CPSF2-203ENST00000554290 PDE6AP16499 860 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 SIRT2Q8IXJ6 389 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
CPSF2-203ENST00000554290 FEZ1Q99689 392 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 CABP5Q9NP86 173 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 PAK6Q9NQU5 681 aaPredicted RBP22.75■■□□□ 1.23
CPSF2-203ENST00000554290 EMILIN3Q9NT22 766 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 GJD2Q9UKL4 321 aa22.75■■□□□ 1.23
CPSF2-203ENST00000554290 BRCA2P51587 3418 aa22.74■■□□□ 1.23
CPSF2-203ENST00000554290 GOLIM4O00461 696 aa22.74■■□□□ 1.23
CPSF2-203ENST00000554290 HMGCRP04035 888 aa22.74■■□□□ 1.23
CPSF2-203ENST00000554290 POLR3DP05423 398 aaPredicted RBP22.74■■□□□ 1.23
CPSF2-203ENST00000554290 RAB3GAP1Q15042 981 aa22.74■■□□□ 1.23
CPSF2-203ENST00000554290 ABCB5Q2M3G0 1257 aa22.74■■□□□ 1.23
CPSF2-203ENST00000554290 CCAR1Q8IX12 1150 aaKnown RBP22.74■■□□□ 1.23
CPSF2-203ENST00000554290 MAPK4P31152 587 aa22.73■■□□□ 1.23
CPSF2-203ENST00000554290 USP14P54578 494 aa22.73■■□□□ 1.23
CPSF2-203ENST00000554290 C12orf42Q96LP6 360 aa22.73■■□□□ 1.23
CPSF2-203ENST00000554290 RBPJLQ9UBG7 517 aa22.73■■□□□ 1.23
CPSF2-203ENST00000554290 COLQQ9Y215 455 aaPredicted RBP22.73■■□□□ 1.23
CPSF2-203ENST00000554290 PLCD1P51178 756 aa22.72■■□□□ 1.23
CPSF2-203ENST00000554290 NUDT12Q9BQG2 462 aa22.72■■□□□ 1.23
CPSF2-203ENST00000554290 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.72■■□□□ 1.23
CPSF2-203ENST00000554290 TXNRD2Q9NNW7 524 aa22.72■■□□□ 1.23
CPSF2-203ENST00000554290 NR2E3Q9Y5X4 410 aa22.72■■□□□ 1.23
CPSF2-203ENST00000554290 ZNF532Q9HCE3 1301 aa22.72■■□□□ 1.23
CPSF2-203ENST00000554290 MYH1P12882 1939 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L15C9J2P7 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L13C9JLJ4 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L11C9JVI0 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L18D6R9N7 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L22D6RA61 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L17D6RBQ6 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L19D6RCP7 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L20D6RJB6 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 USP17L24Q0WX57 530 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 PDE3AQ14432 1141 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 ZYXQ15942 572 aaKnown RBP22.71■■□□□ 1.23
CPSF2-203ENST00000554290 SOCS4Q8WXH5 440 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 PAGR1Q9BTK6 254 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 KIAA1683Q9H0B3 1180 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 CRISPLD2Q9H0B8 497 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms