RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 PCGF6Q9BYE7 350 aa6.53□□□□□ -1.36
PABPN1-204ENST00000554062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.53□□□□□ -1.367e-6■□□□□ 10.7
PABPN1-204ENST00000554062 ANTXR1Q9H6X2 564 aa6.53□□□□□ -1.36
PABPN1-204ENST00000554062 PCDH12Q9NPG4 1184 aa6.53□□□□□ -1.36
PABPN1-204ENST00000554062 PFDN2Q9UHV9 154 aa6.53□□□□□ -1.36
PABPN1-204ENST00000554062 HIF3AQ9Y2N7 669 aa6.53□□□□□ -1.36
PABPN1-204ENST00000554062 MEGF11A6BM72 1044 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 B2RBV5 119 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 ADAMTS2O95450 1211 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 BCRP11274 1271 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 PMS1P54277 932 aaKnown RBP6.52□□□□□ -1.37
PABPN1-204ENST00000554062 GYS2P54840 703 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 SQSTM1Q13501 440 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 DUOXA2Q1HG44 320 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 GNPTABQ3T906 1256 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 KIAA1211LQ6NV74 962 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 SLC9A7Q96T83 725 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 RNF208Q9H0X6 261 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 TYW1Q9NV66 732 aaKnown RBP6.52□□□□□ -1.37
PABPN1-204ENST00000554062 PCDHGC5Q9Y5F6 944 aa6.52□□□□□ -1.37
PABPN1-204ENST00000554062 ANKRD34BA5PLL1 514 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 UPK3BL1B0FP48 263 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 UPK3BL2E5RIL1 263 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 RGS13O14921 159 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 ECEL1O95672 775 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 ACRP10323 421 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 NID1P14543 1247 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 CDK8P49336 464 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 RNF4P78317 190 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 NUTM2GQ5VZR2 741 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 ZNF787Q6DD87 383 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 C12orf40Q86WS4 652 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 CRACR2BQ8N4Y2 399 aaPredicted RBP6.51□□□□□ -1.37
PABPN1-204ENST00000554062 ZBTB38Q8NAP3 1195 aaPredicted RBP6.51□□□□□ -1.37
PABPN1-204ENST00000554062 ACSF2Q96CM8 615 aaPredicted RBP6.51□□□□□ -1.37
PABPN1-204ENST00000554062 TMEM87BQ96K49 555 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 CCDC74BQ96LY2 380 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 RUSC1Q9BVN2 902 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 GBP3Q9H0R5 595 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 PIDD1Q9HB75 910 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 ENAMQ9NRM1 1142 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 CRIM1Q9NZV1 1036 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 SUCOQ9UBS9 1254 aaKnown RBP6.51□□□□□ -1.37
PABPN1-204ENST00000554062 LEMD3Q9Y2U8 911 aa6.51□□□□□ -1.37
PABPN1-204ENST00000554062 TMPRSS2O15393 492 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 CLEC3AO75596 197 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 VIL1P09327 827 aaKnown RBP6.5□□□□□ -1.37
PABPN1-204ENST00000554062 GBP1P32455 592 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 FOXD4L6Q3SYB3 417 aaPredicted RBP6.5□□□□□ -1.37
PABPN1-204ENST00000554062 MRM1Q6IN84 353 aaKnown RBP6.5□□□□□ -1.37
PABPN1-204ENST00000554062 FOXD4L3Q6VB84 417 aaPredicted RBP6.5□□□□□ -1.37
PABPN1-204ENST00000554062 SPATC1Q76KD6 591 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 FBXO11Q86XK2 927 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 GPR161Q8N6U8 529 aaKnown RBP6.5□□□□□ -1.37
PABPN1-204ENST00000554062 CYB5D2Q8WUJ1 264 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 LTBP3Q9NS15 1303 aa6.5□□□□□ -1.37
PABPN1-204ENST00000554062 DIAPH1O60610 1272 aaKnown RBP6.49□□□□□ -1.37
PABPN1-204ENST00000554062 RFPL3O75679 317 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 ASMTLO95671 621 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 APPP05067 770 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 SLURP2P0DP57 97 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 HSP90AA2PQ14568 343 aaPredicted RBP6.49□□□□□ -1.37
PABPN1-204ENST00000554062 AKAP4Q5JQC9 854 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 PPM1JQ5JR12 505 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 RNFT1Q5M7Z0 435 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 TRAPPC3LQ5T215 181 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 ANKRD34AQ69YU3 496 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 KRT26Q7Z3Y9 468 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 DMRTC2Q8IXT2 367 aaPredicted RBP6.49□□□□□ -1.37
PABPN1-204ENST00000554062 GALNT11Q8NCW6 608 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 SMG8Q8ND04 991 aaKnown RBP6.49□□□□□ -1.37
PABPN1-204ENST00000554062 MFSD3Q96ES6 412 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 APBA2Q99767 749 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
PABPN1-204ENST00000554062 TJP2Q9UDY2 1190 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 AP4E1Q9UPM8 1137 aa6.49□□□□□ -1.37
PABPN1-204ENST00000554062 TM4SF5O14894 197 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 ADAM11O75078 769 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 RAB11FIP3O75154 756 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 CTSBP07858 339 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 ADH5P11766 374 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 SOX5P35711 763 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 ZYXQ15942 572 aaKnown RBP6.48□□□□□ -1.37
PABPN1-204ENST00000554062 HEATR6Q6AI08 1181 aaKnown RBP6.48□□□□□ -1.37
PABPN1-204ENST00000554062 FDX2Q6P4F2 183 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 ILDR2Q71H61 639 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 FMR1NBQ8N0W7 255 aaPredicted RBP6.48□□□□□ -1.37
PABPN1-204ENST00000554062 MFSD2AQ8NA29 543 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 NINJ1Q92982 152 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 WDR89Q96FK6 387 aaPredicted RBP6.48□□□□□ -1.37
PABPN1-204ENST00000554062 SLC6A18Q96N87 628 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 CDC6Q99741 560 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
PABPN1-204ENST00000554062 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
PABPN1-204ENST00000554062 CHURC1-FNTBB4DL54 471 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms