RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 HSP90AA1P07900 732 aaKnown RBP13.83□□□□□ -0.2
NEK9-202ENST00000553823 RASA1P20936 1047 aa13.83□□□□□ -0.2
NEK9-202ENST00000553823 TMEM67Q5HYA8 995 aa13.83□□□□□ -0.2
NEK9-202ENST00000553823 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
NEK9-202ENST00000553823 CRACR2BQ8N4Y2 399 aaPredicted RBP13.83□□□□□ -0.2
NEK9-202ENST00000553823 GPHNQ9NQX3 736 aaPredicted RBP13.83□□□□□ -0.2
NEK9-202ENST00000553823 ADARB2Q9NS39 739 aaKnown RBP13.83□□□□□ -0.2
NEK9-202ENST00000553823 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.2
NEK9-202ENST00000553823 GLTPD2A6NH11 291 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 TSPY3P0CV98 308 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 TSPY8P0CW00 308 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 LIFRP42702 1097 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 EVCP57679 992 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 TFAP4Q01664 338 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 APOBRQ0VD83 1088 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 ME3Q16798 604 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 FAM47AQ5JRC9 791 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 TRIM34Q9BYJ4 488 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 HACL1Q9UJ83 578 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 SCN4AP35499 1836 aa13.82□□□□□ -0.2
NEK9-202ENST00000553823 ASTN2O75129 1339 aaPredicted RBP13.82□□□□□ -0.2
NEK9-202ENST00000553823 LARGE1O95461 756 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 SHMT1P34896 483 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 HIRAP54198 1017 aaPredicted RBP13.81□□□□□ -0.2
NEK9-202ENST00000553823 CUL4AQ13619 759 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 RASA3Q14644 834 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 WTAPQ15007 396 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 CCDC178Q5BJE1 867 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 METTL16Q86W50 562 aaKnown RBP13.81□□□□□ -0.2
NEK9-202ENST00000553823 APOBEC3FQ8IUX4 373 aaKnown RBP13.81□□□□□ -0.2
NEK9-202ENST00000553823 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 ZNF274Q96GC6 653 aaPredicted RBP13.81□□□□□ -0.2
NEK9-202ENST00000553823 ZSCAN10Q96SZ4 725 aaPredicted RBP13.81□□□□□ -0.2
NEK9-202ENST00000553823 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 LY9Q9HBG7 655 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 TNKSO95271 1327 aa13.81□□□□□ -0.2
NEK9-202ENST00000553823 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 SEC23AQ15436 765 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 ANGEL2Q5VTE6 544 aaKnown RBP13.8□□□□□ -0.2
NEK9-202ENST00000553823 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 ENAHQ8N8S7 591 aaPredicted RBP13.8□□□□□ -0.2
NEK9-202ENST00000553823 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
NEK9-202ENST00000553823 DNAJC18Q9H819 358 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 TCP11L1Q9NUJ3 509 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 PGAP2Q9UHJ9 254 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 HERC5Q9UII4 1024 aaKnown RBP13.8□□□□□ -0.2
NEK9-202ENST00000553823 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
NEK9-202ENST00000553823 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
NEK9-202ENST00000553823 CCDC69A6NI79 296 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 FAM196BA6NMK8 535 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 TBC1D12O60347 775 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 NMT2O60551 498 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 PFKFB2O60825 505 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 PDIA3P30101 505 aaKnown RBP13.79□□□□□ -0.2
NEK9-202ENST00000553823 STK3Q13188 491 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 IFIT1BQ5T764 474 aaKnown RBP13.79□□□□□ -0.2
NEK9-202ENST00000553823 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 CCDC83Q8IWF9 413 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 NECAB1Q8N987 351 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
NEK9-202ENST00000553823 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.79□□□□□ -0.2
NEK9-202ENST00000553823 SENP2Q9HC62 589 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 GGA3Q9NZ52 723 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
NEK9-202ENST00000553823 WDR90Q96KV7 1748 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
NEK9-202ENST00000553823 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 AKR1B1P15121 316 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 EPHX2P34913 555 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 APOA5Q6Q788 366 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 SYNE3Q6ZMZ3 975 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
NEK9-202ENST00000553823 DGKHQ86XP1 1220 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 ANKS1AQ92625 1134 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 GTF3C6Q969F1 213 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 IL17RBQ9NRM6 502 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 SCAF8Q9UPN6 1271 aaKnown RBP13.78□□□□□ -0.2
NEK9-202ENST00000553823 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.78□□□□□ -0.2
NEK9-202ENST00000553823 SLC12A7Q9Y666 1083 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
NEK9-202ENST00000553823 ST3GAL1Q11201 340 aa13.77□□□□□ -0.21
NEK9-202ENST00000553823 CERKLQ49MI3 558 aaPredicted RBP13.77□□□□□ -0.21
NEK9-202ENST00000553823 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
NEK9-202ENST00000553823 TEPSINQ96N21 525 aa13.77□□□□□ -0.21
NEK9-202ENST00000553823 HPS5Q9UPZ3 1129 aa13.77□□□□□ -0.21
NEK9-202ENST00000553823 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.21
NEK9-202ENST00000553823 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
NEK9-202ENST00000553823 MPHOSPH10O00566 681 aaKnown RBP13.76□□□□□ -0.21
NEK9-202ENST00000553823 ZBTB43O43298 467 aa13.76□□□□□ -0.21
NEK9-202ENST00000553823 RCAN1P53805 252 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms