RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 FUT4P22083 530 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 GRK4P32298 578 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 CLCN7P51798 805 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 BNIP3Q12983 259 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 SLBPQ14493 270 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCFD1-210ENST00000553693 AOC3Q16853 763 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 TSNAXIP1Q2TAA8 658 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 ANGEL2Q5VTE6 544 aaKnown RBP7.2□□□□□ -1.26
SCFD1-210ENST00000553693 FAM214BQ7L5A3 538 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 WFDC3Q8IUB2 231 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 FAM161BQ96MY7 647 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 BCL11AQ9H165 835 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 PLAGL2Q9UPG8 496 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
SCFD1-210ENST00000553693 EOMESO95936 686 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 CTSHP09668 335 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 ZNF865P0CJ78 1059 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-210ENST00000553693 CDK8P49336 464 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 PDE4BQ07343 736 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 ZNF792Q3KQV3 632 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 CCDC84Q86UT8 332 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-210ENST00000553693 PHC3Q8NDX5 983 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 MIPEPQ99797 713 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
SCFD1-210ENST00000553693 TPX2Q9ULW0 747 aaKnown RBP7.19□□□□□ -1.26
SCFD1-210ENST00000553693 GFRA2O00451 464 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 BIN1O00499 593 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 CST3P01034 146 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-210ENST00000553693 CD8BP10966 210 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 RPL6Q02878 288 aaKnown RBP7.18□□□□□ -1.26
SCFD1-210ENST00000553693 NKG7Q16617 165 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 C22orf34Q6ZV56 151 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 SPACA3Q8IXA5 215 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 ASB11Q8WXH4 323 aa7.18□□□□□ -1.26
SCFD1-210ENST00000553693 SLITRK5O94991 958 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 PGRP06401 933 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 PWP1Q13610 501 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 SFRP5Q5T4F7 317 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 PRAMEF13Q5VWM6 474 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 LETMD1Q6P1Q0 360 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 MFSD4AQ8N468 514 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 COX4I2Q96KJ9 171 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 TLR6Q9Y2C9 796 aa7.17□□□□□ -1.26
SCFD1-210ENST00000553693 FAM155AB1AL88 458 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-210ENST00000553693 PAPLNO95428 1278 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 BPNT1O95861 308 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 CYP7A1P22680 504 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 LMNB2Q03252 620 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 IKZF1Q13422 519 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 MRPL41Q8IXM3 137 aaKnown RBP7.16□□□□□ -1.26
SCFD1-210ENST00000553693 PI4K2BQ8TCG2 481 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 RC3H2Q9HBD1 1191 aaKnown RBP7.16□□□□□ -1.26
SCFD1-210ENST00000553693 ADAM30Q9UKF2 790 aa7.16□□□□□ -1.26
SCFD1-210ENST00000553693 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-210ENST00000553693 CD96P40200 585 aa7.15□□□□□ -1.26
SCFD1-210ENST00000553693 NKPD1Q17RQ9 610 aa7.15□□□□□ -1.26
SCFD1-210ENST00000553693 SLC23A3Q6PIS1 610 aa7.15□□□□□ -1.26
SCFD1-210ENST00000553693 JARID2Q92833 1246 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-210ENST00000553693 TMEM87BQ96K49 555 aa7.15□□□□□ -1.26
SCFD1-210ENST00000553693 PITPNM2Q9BZ72 1349 aa7.15□□□□□ -1.26
SCFD1-210ENST00000553693 NCANO14594 1321 aa7.14□□□□□ -1.27
SCFD1-210ENST00000553693 ZNF326Q5BKZ1 582 aaKnown RBP7.14□□□□□ -1.27
SCFD1-210ENST00000553693 SLC6A19Q695T7 634 aa7.14□□□□□ -1.27
SCFD1-210ENST00000553693 ATG4DQ86TL0 474 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-210ENST00000553693 RELL1Q8IUW5 271 aa7.14□□□□□ -1.27
SCFD1-210ENST00000553693 TMEM74Q96NL1 305 aa7.14□□□□□ -1.27
SCFD1-210ENST00000553693 BCL2L13Q9BXK5 485 aa7.14□□□□□ -1.27
SCFD1-210ENST00000553693 MBNL3Q9NUK0 354 aaKnown RBP7.14□□□□□ -1.27
SCFD1-210ENST00000553693 TJP2Q9UDY2 1190 aa7.14□□□□□ -1.27
SCFD1-210ENST00000553693 CILPO75339 1184 aa7.13□□□□□ -1.27
SCFD1-210ENST00000553693 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
SCFD1-210ENST00000553693 GBP2P32456 591 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-210ENST00000553693 ETV3P41162 512 aa7.13□□□□□ -1.27
SCFD1-210ENST00000553693 KIR3DL1P43629 444 aa7.13□□□□□ -1.27
SCFD1-210ENST00000553693 TAGLNQ01995 201 aaKnown RBP7.13□□□□□ -1.27
SCFD1-210ENST00000553693 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-210ENST00000553693 XAGE3Q8WTP9 111 aa7.13□□□□□ -1.27
SCFD1-210ENST00000553693 RHOVQ96L33 236 aa7.13□□□□□ -1.27
SCFD1-210ENST00000553693 RSRP1Q9BUV0 290 aa7.13□□□□□ -1.27
SCFD1-210ENST00000553693 CARMIL2Q6F5E8 1435 aa7.12□□□□□ -1.27
SCFD1-210ENST00000553693 PRRG2O14669 202 aa7.12□□□□□ -1.27
SCFD1-210ENST00000553693 MCATQ8IVS2 390 aaKnown RBP7.12□□□□□ -1.27
SCFD1-210ENST00000553693 GATAD2BQ8WXI9 593 aa7.12□□□□□ -1.27
SCFD1-210ENST00000553693 DPH2Q9BQC3 489 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-210ENST00000553693 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
SCFD1-210ENST00000553693 ADAMTS6Q9UKP5 1117 aa7.12□□□□□ -1.27
SCFD1-210ENST00000553693 CAPN6Q9Y6Q1 641 aa7.12□□□□□ -1.27
SCFD1-210ENST00000553693 PRR33A8MZF0 331 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 PF4P02776 101 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 YARSP54577 528 aaKnown RBP7.11□□□□□ -1.27
SCFD1-210ENST00000553693 ZP2Q05996 745 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 SNAP47Q5SQN1 464 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 BNC2Q6ZN30 1099 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-210ENST00000553693 THAP5Q7Z6K1 395 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 LRRN4CLQ8ND94 238 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 GIPC2Q8TF65 315 aa7.11□□□□□ -1.27
SCFD1-210ENST00000553693 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 FAM221AA4D161 298 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 F6X3S4 739 aa7.1□□□□□ -1.27
SCFD1-210ENST00000553693 CBX7O95931 251 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms