RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 DOC2BQ14184 412 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SLC4A8Q2Y0W8 1093 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TPTE2Q6XPS3 522 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SLCO4C1Q6ZQN7 724 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CD99L2Q8TCZ2 262 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 DCPSQ96C86 337 aaKnown RBP7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SEMA6BQ9H3T3 888 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 STAP2Q9UGK3 403 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 NIP7Q9Y221 180 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ZNF652Q9Y2D9 606 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 USP16Q9Y5T5 823 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 RPTORQ8N122 1335 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SYNGAP1Q96PV0 1343 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 CACNA1AO00555 2505 aa7.41□□□□□ -1.22
SMARCE1P3-201ENST00000553649 YDJCA8MPS7 323 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 UBE2Q2LH0YL09 131 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GNB5O14775 395 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TCERG1O14776 1098 aaKnown RBP7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 BNIP3LO60238 219 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 EPXP11678 715 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 RFC5P40937 340 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 DGKGP49619 791 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 SREBF2Q12772 1141 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 TNIP1Q15025 636 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 FOXD4L6Q3SYB3 417 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 FOXD4L3Q6VB84 417 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 NGEFQ8N5V2 710 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 DPF2Q92785 391 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 ERO1AQ96HE7 468 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PHACTR3Q96KR7 559 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GUCD1Q96NT3 240 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 KRTAP4-12Q9BQ66 201 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 EFCC1Q9HA90 598 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 GGA3Q9NZ52 723 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PHF24Q9UPV7 400 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 NR2E3Q9Y5X4 410 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 PTCH2Q9Y6C5 1203 aa7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 IBTKQ9P2D0 1353 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1P3-201ENST00000553649 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MYCP01106 439 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 BMP4P12644 408 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 AMPD1P23109 780 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 PRKAR2BP31323 418 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 LRIT3Q3SXY7 679 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MCM10Q7L590 875 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 CCER1Q8TC90 406 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 PCDHB11Q9Y5F2 797 aa7.39□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SNRPA1P09661 255 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 FGFR3P22607 806 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MSX1P28360 303 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 KIAA2012Q0VF49 1180 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 DCTN1Q14203 1278 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 HLFQ16534 295 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SLC9C1Q4G0N8 1177 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 C4orf17Q53FE4 359 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 CRAMP1Q96RY5 1269 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 GDF15Q99988 308 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 HTATIP2Q9BUP3 242 aa7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ATXN7L1Q9ULK2 861 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1P3-201ENST00000553649 CLSPNQ9HAW4 1339 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 TMEM265A0A087WTH1 108 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 BMP8BP34820 402 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ZMYM1Q5SVZ6 1142 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 NBPF11Q86T75 865 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RPGRQ92834 1020 aaKnown RBP7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MIS18AQ9NYP9 233 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
SMARCE1P3-201ENST00000553649 CEMIPQ8WUJ3 1361 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 PSMD14O00487 310 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 U2AF1L5P0DN76 240 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 GPTP24298 496 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 U2AF1Q01081 240 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 LBRQ14739 615 aaKnown RBP7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RNF20Q5VTR2 975 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SUPT20HQ8NEM7 779 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SH3TC2Q8TF17 1288 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 XAGE2Q96GT9 111 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 CFAP53Q96M91 514 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ZSCAN10Q96SZ4 725 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ATP6V0A2Q9Y487 856 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 DUOX1Q9NRD9 1551 aa7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 COL3A1P02461 1466 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1P3-201ENST00000553649 NEURL1BA8MQ27 555 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 GNRH1P01148 92 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SP3Q02447 781 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 CRHR2Q13324 411 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MTFR1Q15390 333 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ANGEL2Q5VTE6 544 aaKnown RBP7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 KIF6Q6ZMV9 814 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 NYXQ9GZU5 481 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RRP7AQ9Y3A4 280 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms