RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 FEZ1Q99689 392 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 ZBTB40Q9NUA8 1239 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 CPSF2Q9P2I0 782 aaKnown RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 PARP2Q9UGN5 583 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 BCORQ6W2J9 1755 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 LRP5O75197 1615 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 ATP9BO43861 1147 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 DDAH1O94760 285 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 RECKO95980 971 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 MYCP01106 439 aaPredicted RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 CCND1P24385 295 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 HOXC9P31274 260 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 CASQ1P31415 396 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 MAP2K2P36507 400 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 NOM1Q5C9Z4 860 aaKnown RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 CC2D1AQ6P1N0 951 aaPredicted RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 GET4Q7L5D6 327 aaPredicted RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 ARHGEF25Q86VW2 580 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 FAM184AQ8NB25 1140 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SFMBT1Q9UHJ3 866 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 THSD7AQ9UPZ6 1657 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 ITGB4P16144 1822 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SPEF2Q9C093 1822 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 GNAI1P63096 354 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 ITPKCQ96DU7 683 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 OCSTAMPQ9BR26 566 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 GGNBP2Q9H3C7 697 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 C19orf44Q9H6X5 657 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SENP2Q9HC62 589 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 MED4Q9NPJ6 270 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 PCDHB11Q9Y5F2 797 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 CCP110O43303 1012 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 PRC1O43663 620 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 NR3C2P08235 984 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 PAX7P23759 505 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 CEBPAP49715 358 aaPredicted RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 MVPQ14764 893 aaKnown RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 TOMM20Q15388 145 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 TBCELQ5QJ74 424 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SYCP2LQ5T4T6 812 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 TTC19Q6DKK2 380 aaPredicted RBP4.69□□□□□ -1.66
RDH11-204ENST00000553578 CRBNQ96SW2 442 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 ZFAND3Q9H8U3 227 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 AAASQ9NRG9 546 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 SYNRGQ9UMZ2 1314 aa4.69□□□□□ -1.66
RDH11-204ENST00000553578 HNRNPH2P55795 449 aaKnown RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 HDLBPQ00341 1268 aaKnown RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 CCDC81Q6ZN84 652 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 ANKMY2Q8IV38 441 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 FAM210AQ96ND0 272 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 PIF1Q9H611 641 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 RNF19AQ9NV58 838 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 DCTN4Q9UJW0 460 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 ANAPC4Q9UJX5 808 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 NOD1Q9Y239 953 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 RGPD3A6NKT7 1758 aaPredicted RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 RGPD4Q7Z3J3 1758 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 UTYO14607 1347 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 PPFIA4O75335 1185 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 BMP2P12643 396 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 HCLS1P14317 486 aaPredicted RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 TIMP2P16035 220 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 SMCPP49901 116 aaPredicted RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 ITKQ08881 620 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 KIAA2012Q0VF49 1180 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 SEPT6Q14141 434 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 EML3Q32P44 896 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 TTC31Q49AM3 519 aaPredicted RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 C6orf118Q5T5N4 469 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 WWC2Q6AWC2 1192 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 CCDC34Q96HJ3 373 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 GPATCH3Q96I76 525 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 TTF2Q9UNY4 1162 aaKnown RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 MAP3K5Q99683 1374 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 A0A1B0GUL6 1792 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 PNMA6FA0A0J9YX94 578 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 ERVH48-1M5A8F1 160 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 CTAGE5O15320 804 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 EPB41L2O43491 1005 aaKnown RBP4.68□□□□□ -1.66
RDH11-204ENST00000553578 SLFN14P0C7P3 912 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 TERF2Q15554 542 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 TTLL5Q6EMB2 1281 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 HSCBQ8IWL3 235 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 PHACTR3Q96KR7 559 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 RMI1Q9H9A7 625 aa4.68□□□□□ -1.66
RDH11-204ENST00000553578 CASZ1Q86V15 1759 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 KIAA1551Q9HCM1 1747 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 MAPK8IP3Q9UPT6 1336 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 ZBTB7BO15156 539 aaPredicted RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 NEBLO76041 1014 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 ATG7O95352 703 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 AP1ARQ63HQ0 302 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 DDX46Q7L014 1031 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 CRIPAKQ8N1N5 446 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 TSEN34Q9BSV6 310 aaKnown RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 RBSNQ9H1K0 784 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 COL5A2P05997 1499 aaPredicted RBP4.67□□□□□ -1.66
RDH11-204ENST00000553578 A0A1B0GUL7 405 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 CDC45O75419 566 aa4.67□□□□□ -1.66
RDH11-204ENST00000553578 FBXO24O75426 580 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms