RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 PRKCZQ05513 592 aa18.38■□□□□ 0.53
SDR39U1-205ENST00000553546 PDE3AQ14432 1141 aa18.38■□□□□ 0.53
SDR39U1-205ENST00000553546 SLAIN1Q8ND83 568 aa18.38■□□□□ 0.53
SDR39U1-205ENST00000553546 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-205ENST00000553546 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
SDR39U1-205ENST00000553546 COL6A3P12111 3177 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 H0YGN5 161 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 APBB1O00213 710 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 TNPO2O14787 897 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 BACE1P56817 501 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 UBXN2AP68543 259 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 TTC6Q86TZ1 520 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 SIRT2Q8IXJ6 389 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 EHD4Q9H223 541 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 TMOD4Q9NZQ9 345 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 ZBTB21Q9ULJ3 1066 aa18.37■□□□□ 0.53
SDR39U1-205ENST00000553546 MYCP01106 439 aaPredicted RBP18.36■□□□□ 0.53
SDR39U1-205ENST00000553546 MTMR2Q13614 643 aa18.36■□□□□ 0.53
SDR39U1-205ENST00000553546 COA7Q96BR5 231 aa18.36■□□□□ 0.53
SDR39U1-205ENST00000553546 BIN2Q9UBW5 565 aaPredicted RBP18.36■□□□□ 0.53
SDR39U1-205ENST00000553546 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
SDR39U1-205ENST00000553546 MAGEB6P1A0A0J9YX57 407 aa18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 USP17L10C9JJH3 530 aa18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 GDF11O95390 407 aa18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 IRX3P78415 501 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 IRF5Q13568 498 aa18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 ASCC2Q9H1I8 757 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-205ENST00000553546 PDE6AP16499 860 aa18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 FLT3LGP49771 235 aa18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 PXYLP1Q8TE99 480 aa18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 RIOK1Q9BRS2 568 aaKnown RBP18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 CRNKL1Q9BZJ0 848 aaKnown RBP18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 GABRQQ9UN88 632 aa18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 NAV1Q8NEY1 1877 aa18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 DDX60LQ5H9U9 1706 aaKnown RBP18.34■□□□□ 0.53
SDR39U1-205ENST00000553546 GOLIM4O00461 696 aa18.33■□□□□ 0.52
SDR39U1-205ENST00000553546 ADCY3O60266 1144 aa18.33■□□□□ 0.52
SDR39U1-205ENST00000553546 HOXA7P31268 230 aaPredicted RBP18.33■□□□□ 0.52
SDR39U1-205ENST00000553546 MTFR1Q15390 333 aa18.33■□□□□ 0.52
SDR39U1-205ENST00000553546 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
SDR39U1-205ENST00000553546 DLL1O00548 723 aa18.32■□□□□ 0.52
SDR39U1-205ENST00000553546 GJB1P08034 283 aa18.32■□□□□ 0.52
SDR39U1-205ENST00000553546 CCL5P13501 91 aa18.32■□□□□ 0.52
SDR39U1-205ENST00000553546 JAG1P78504 1218 aa18.32■□□□□ 0.52
SDR39U1-205ENST00000553546 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
SDR39U1-205ENST00000553546 ZNF532Q9HCE3 1301 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 GH2P01242 217 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 POLR3DP05423 398 aaPredicted RBP18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 CAPN2P17655 700 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 ATP5JP18859 108 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 RNF208Q9H0X6 261 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 PAG1Q9NWQ8 432 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 RBM27Q9P2N5 1060 aaKnown RBP18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 MORF4L1Q9UBU8 362 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 TAOK2Q9UL54 1235 aa18.31■□□□□ 0.52
SDR39U1-205ENST00000553546 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
SDR39U1-205ENST00000553546 GJA8P48165 433 aa18.3■□□□□ 0.52
SDR39U1-205ENST00000553546 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-205ENST00000553546 CERKLQ49MI3 558 aaPredicted RBP18.3■□□□□ 0.52
SDR39U1-205ENST00000553546 FEZ1Q99689 392 aa18.3■□□□□ 0.52
SDR39U1-205ENST00000553546 LAMA3Q16787 3333 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 TCRBV5S4A2TA0A5A2 114 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 USP14P54578 494 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 HERVK_113P62684 666 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 ABCB5Q2M3G0 1257 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 C20orf194Q5TEA3 1177 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 C12orf42Q96LP6 360 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 HAUS7Q99871 368 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 BOLA2Q9H3K6 86 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 MCM9Q9NXL9 1143 aa18.29■□□□□ 0.52
SDR39U1-205ENST00000553546 A0A0C4DFX4 3053 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 MYH7P12883 1935 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 INHAP05111 366 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 ELNP15502 786 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 ADD2P35612 726 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 RAB3GAP1Q15042 981 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 P2RX7Q99572 595 aaKnown RBP18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 EMILIN3Q9NT22 766 aa18.28■□□□□ 0.52
SDR39U1-205ENST00000553546 SHMT1P34896 483 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 PLCD1P51178 756 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 GABPAQ06546 454 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 GPRC5AQ8NFJ5 357 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 U2AF1L4Q8WU68 220 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
SDR39U1-205ENST00000553546 UNC93B1Q9H1C4 597 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms