RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SLC4A4Q9Y6R1 1079 aa28.41■■■□□ 2.14
TDP1-205ENST00000553527 CYP2C8P10632 490 aa28.4■■■□□ 2.14
TDP1-205ENST00000553527 CYP2D6P10635 497 aa28.4■■■□□ 2.14
TDP1-205ENST00000553527 PKN2Q16513 984 aaKnown RBP28.4■■■□□ 2.14
TDP1-205ENST00000553527 EHD4Q9H223 541 aa28.4■■■□□ 2.14
TDP1-205ENST00000553527 RNF113AO15541 343 aaKnown RBP28.39■■■□□ 2.14
TDP1-205ENST00000553527 HMGCS2P54868 508 aa28.39■■■□□ 2.14
TDP1-205ENST00000553527 CERKLQ49MI3 558 aaPredicted RBP28.39■■■□□ 2.14
TDP1-205ENST00000553527 DDX60LQ5H9U9 1706 aaKnown RBP28.39■■■□□ 2.14
TDP1-205ENST00000553527 OTOP1Q7RTM1 612 aa28.39■■■□□ 2.14
TDP1-205ENST00000553527 ZBTB21Q9ULJ3 1066 aa28.39■■■□□ 2.14
TDP1-205ENST00000553527 GH2P01242 217 aa28.38■■■□□ 2.13
TDP1-205ENST00000553527 TATDN1Q6P1N9 297 aa28.38■■■□□ 2.13
TDP1-205ENST00000553527 FSD1Q9BTV5 496 aa28.38■■■□□ 2.13
TDP1-205ENST00000553527 TBC1D2Q9BYX2 928 aa28.38■■■□□ 2.13
TDP1-205ENST00000553527 EFCC1Q9HA90 598 aa28.38■■■□□ 2.13
TDP1-205ENST00000553527 ATP8A2Q9NTI2 1148 aa28.38■■■□□ 2.13
TDP1-205ENST00000553527 CAP1Q01518 475 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 TREML2Q5T2D2 321 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 ERICH6BQ5W0A0 696 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 OSBP2Q969R2 916 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 DDRGK1Q96HY6 314 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 PARK7Q99497 189 aaKnown RBP28.37■■■□□ 2.13
TDP1-205ENST00000553527 MYH8P13535 1937 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 SALL3Q9BXA9 1300 aa28.37■■■□□ 2.13
TDP1-205ENST00000553527 CYP2D7A0A087X1C5 515 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 MTMR2Q13614 643 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 RAB3GAP1Q15042 981 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 FBXO46Q6PJ61 603 aaPredicted RBP28.36■■■□□ 2.13
TDP1-205ENST00000553527 C17orf99Q6UX52 265 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 SMC5Q8IY18 1101 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 APPBP2Q92624 585 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 HPS5Q9UPZ3 1129 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 ZSWIM8A7E2V4 1837 aa28.36■■■□□ 2.13
TDP1-205ENST00000553527 USP17L12C9JPN9 530 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 USP17L21D6R901 530 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 ZFYP08048 801 aaPredicted RBP28.35■■■□□ 2.13
TDP1-205ENST00000553527 SHMT1P34896 483 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 PDE1AP54750 535 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 KIF22Q14807 665 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 ABCB5Q2M3G0 1257 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 DYNLL2Q96FJ2 89 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 STRBPQ96SI9 672 aaKnown RBP28.35■■■□□ 2.13
TDP1-205ENST00000553527 WDR18Q9BV38 432 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 AGTPBP1Q9UPW5 1226 aa28.35■■■□□ 2.13
TDP1-205ENST00000553527 MPHOSPH10O00566 681 aaKnown RBP28.34■■■□□ 2.13
TDP1-205ENST00000553527 LRRFIP1Q32MZ4 808 aaKnown RBP28.34■■■□□ 2.13
TDP1-205ENST00000553527 AMOTL1Q8IY63 956 aa28.34■■■□□ 2.13
TDP1-205ENST00000553527 SLC44A5Q8NCS7 719 aa28.34■■■□□ 2.13
TDP1-205ENST00000553527 ARHGAP39Q9C0H5 1083 aa28.34■■■□□ 2.13
TDP1-205ENST00000553527 CABP5Q9NP86 173 aa28.34■■■□□ 2.13
TDP1-205ENST00000553527 GINM1Q9NU53 330 aa28.34■■■□□ 2.13
TDP1-205ENST00000553527 USP17L10C9JJH3 530 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 SMIM22K7EJ46 135 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 M0R2C6 588 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 BACE1P56817 501 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 GABPAQ06546 454 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 PROCA1Q8NCQ7 364 aaPredicted RBP28.33■■■□□ 2.13
TDP1-205ENST00000553527 SMCR8Q8TEV9 937 aaPredicted RBP28.33■■■□□ 2.13
TDP1-205ENST00000553527 SEC62Q99442 399 aaKnown RBP28.33■■■□□ 2.13
TDP1-205ENST00000553527 TMOD4Q9NZQ9 345 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 STAP2Q9UGK3 403 aa28.33■■■□□ 2.13
TDP1-205ENST00000553527 LACTBP83111 547 aaPredicted RBP28.32■■■□□ 2.12
TDP1-205ENST00000553527 ARHGEF6Q15052 776 aa28.32■■■□□ 2.12
TDP1-205ENST00000553527 CHD1LQ86WJ1 897 aa28.32■■■□□ 2.12
TDP1-205ENST00000553527 SLC45A1Q9Y2W3 748 aa28.32■■■□□ 2.12
TDP1-205ENST00000553527 GPAA1O43292 621 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 APPP05067 770 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 ZYXQ15942 572 aaKnown RBP28.31■■■□□ 2.12
TDP1-205ENST00000553527 C12orf60Q5U649 245 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 CCDC136Q96JN2 1154 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 PTPN22Q9Y2R2 807 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 ADGRA2Q96PE1 1338 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 LOC285556D6RIA3 1793 aa28.31■■■□□ 2.12
TDP1-205ENST00000553527 SH3D19Q5HYK7 790 aa28.3■■■□□ 2.12
TDP1-205ENST00000553527 CTR9Q6PD62 1173 aa28.3■■■□□ 2.12
TDP1-205ENST00000553527 STK11IPQ8N1F8 1099 aa28.3■■■□□ 2.12
TDP1-205ENST00000553527 FEZ1Q99689 392 aa28.3■■■□□ 2.12
TDP1-205ENST00000553527 GSG1L2A8MUP6 293 aa28.29■■■□□ 2.12
TDP1-205ENST00000553527 C19orf81C9J6K1 198 aa28.29■■■□□ 2.12
TDP1-205ENST00000553527 NUCB1Q02818 461 aa28.29■■■□□ 2.12
TDP1-205ENST00000553527 SWAP70Q9UH65 585 aa28.29■■■□□ 2.12
TDP1-205ENST00000553527 PNMA3Q9UL41 463 aa28.29■■■□□ 2.12
TDP1-205ENST00000553527 OSBPP22059 807 aa28.28■■■□□ 2.12
TDP1-205ENST00000553527 PSMC4P43686 418 aa28.28■■■□□ 2.12
TDP1-205ENST00000553527 PABPC4Q13310 644 aaKnown RBP eCLIP28.28■■■□□ 2.12
TDP1-205ENST00000553527 SEPT2Q15019 361 aa28.28■■■□□ 2.12
TDP1-205ENST00000553527 EVI5LQ96CN4 794 aa28.28■■■□□ 2.12
TDP1-205ENST00000553527 MINDY4BA8MYZ0 360 aa28.27■■■□□ 2.12
TDP1-205ENST00000553527 TRIM6-TRIM34B2RNG4 842 aa28.27■■■□□ 2.12
TDP1-205ENST00000553527 FMNL1O95466 1100 aaPredicted RBP28.27■■■□□ 2.12
TDP1-205ENST00000553527 CDK8P49336 464 aa28.27■■■□□ 2.12
TDP1-205ENST00000553527 ACER1Q8TDN7 264 aa28.27■■■□□ 2.12
TDP1-205ENST00000553527 ASCC2Q9H1I8 757 aaPredicted RBP28.27■■■□□ 2.12
TDP1-205ENST00000553527 PPP4R2Q9NY27 417 aa28.27■■■□□ 2.12
TDP1-205ENST00000553527 MGAMO43451 1857 aa28.27■■■□□ 2.12
TDP1-205ENST00000553527 BCRP11274 1271 aa28.26■■■□□ 2.11
TDP1-205ENST00000553527 CTGFP29279 349 aa28.26■■■□□ 2.11
TDP1-205ENST00000553527 GUCY1A2P33402 732 aa28.26■■■□□ 2.11
TDP1-205ENST00000553527 SOX10P56693 466 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms