RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 METTL16Q86W50 562 aaKnown RBP12.31□□□□□ -0.44
LINC00517-201ENST00000553396 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 CD99L2Q8TCZ2 262 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
LINC00517-201ENST00000553396 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
LINC00517-201ENST00000553396 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
LINC00517-201ENST00000553396 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
LINC00517-201ENST00000553396 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 TLR2O60603 784 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 GLRX3O76003 335 aaKnown RBP12.3□□□□□ -0.44
LINC00517-201ENST00000553396 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
LINC00517-201ENST00000553396 ASNSP08243 561 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 CYP2C8P10632 490 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 CYP2D6P10635 497 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 SP3Q02447 781 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 SPP2Q13103 211 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 FASTKD5Q7L8L6 764 aaKnown RBP12.3□□□□□ -0.44
LINC00517-201ENST00000553396 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 EHD4Q9H223 541 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
LINC00517-201ENST00000553396 CPA4Q9UI42 421 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 ZBTB21Q9ULJ3 1066 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
LINC00517-201ENST00000553396 IGHDP01880 384 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 HMGCS2P54868 508 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 CAP1Q01518 475 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 MTMR2Q13614 643 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 PARK7Q99497 189 aaKnown RBP12.29□□□□□ -0.44
LINC00517-201ENST00000553396 FSD1Q9BTV5 496 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 AS3MTQ9HBK9 375 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
LINC00517-201ENST00000553396 CYP2D7A0A087X1C5 515 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 RNF113AO15541 343 aaKnown RBP12.28□□□□□ -0.44
LINC00517-201ENST00000553396 GH2P01242 217 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 SHMT1P34896 483 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 OTOP1Q7RTM1 612 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 SLC44A5Q8NCS7 719 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 APPBP2Q92624 585 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 ADGRA2Q96PE1 1338 aa12.28□□□□□ -0.44
LINC00517-201ENST00000553396 MGAMO43451 1857 aa12.27□□□□□ -0.44
LINC00517-201ENST00000553396 SMIM22K7EJ46 135 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 M0R2C6 588 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 PDE1AP54750 535 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 RAB3GAP1Q15042 981 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 PKN2Q16513 984 aaKnown RBP12.27□□□□□ -0.45
LINC00517-201ENST00000553396 ABCB5Q2M3G0 1257 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 CERKLQ49MI3 558 aaPredicted RBP12.27□□□□□ -0.45
LINC00517-201ENST00000553396 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.45
LINC00517-201ENST00000553396 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 DYNLL2Q96FJ2 89 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 EFCC1Q9HA90 598 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 AGTPBP1Q9UPW5 1226 aa12.27□□□□□ -0.45
LINC00517-201ENST00000553396 USP17L12C9JPN9 530 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 USP17L21D6R901 530 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 MPHOSPH10O00566 681 aaKnown RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 GPAA1O43292 621 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 LACTBP83111 547 aaPredicted RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 GABPAQ06546 454 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 C17orf99Q6UX52 265 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 AMOTL1Q8IY63 956 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 SMCR8Q8TEV9 937 aaPredicted RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 STRBPQ96SI9 672 aaKnown RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 SEC62Q99442 399 aaKnown RBP12.26□□□□□ -0.45
LINC00517-201ENST00000553396 WDR18Q9BV38 432 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 GINM1Q9NU53 330 aa12.26□□□□□ -0.45
LINC00517-201ENST00000553396 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 BACE1P56817 501 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 KIF22Q14807 665 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 ZYXQ15942 572 aaKnown RBP12.25□□□□□ -0.45
LINC00517-201ENST00000553396 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 C12orf60Q5U649 245 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 CHD1LQ86WJ1 897 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 FEZ1Q99689 392 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 CABP5Q9NP86 173 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 TMOD4Q9NZQ9 345 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 STAP2Q9UGK3 403 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 SLC45A1Q9Y2W3 748 aa12.25□□□□□ -0.45
LINC00517-201ENST00000553396 APPP05067 770 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 BCRP11274 1271 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 CTGFP29279 349 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 SOX10P56693 466 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 NUCB1Q02818 461 aa12.24□□□□□ -0.45
LINC00517-201ENST00000553396 SEPT2Q15019 361 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms