RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SART3Q15020 963 aaKnown RBP19.99■□□□□ 0.79
SYNE3-202ENST00000553340 AKNAD1Q5T1N1 836 aa19.99■□□□□ 0.79
SYNE3-202ENST00000553340 IGSF22Q8N9C0 903 aa19.99■□□□□ 0.79
SYNE3-202ENST00000553340 CDHR2Q9BYE9 1310 aa19.99■□□□□ 0.79
SYNE3-202ENST00000553340 PDE8BO95263 885 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 ARID4AP29374 1257 aaPredicted RBP19.98■□□□□ 0.79
SYNE3-202ENST00000553340 PHKA1P46020 1223 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 NKX1-1Q15270 411 aaPredicted RBP19.98■□□□□ 0.79
SYNE3-202ENST00000553340 MFSD6Q6ZSS7 791 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 CEP112Q8N8E3 955 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 VGLL2Q8N8G2 317 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 EPB41L4AQ9HCS5 686 aaPredicted RBP19.98■□□□□ 0.79
SYNE3-202ENST00000553340 MYO5AQ9Y4I1 1855 aaKnown RBP19.98■□□□□ 0.79
SYNE3-202ENST00000553340 PAPPAQ13219 1627 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 TNS2Q63HR2 1409 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 CCDC196A0A1B0GTZ2 297 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 TEX33O43247 280 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 NR5A1Q13285 461 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 MUM1L1Q5H9M0 696 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 CSRNP2Q9H175 543 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 ZSWIM4Q9H7M6 989 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 LRP6O75581 1613 aa19.98■□□□□ 0.79
SYNE3-202ENST00000553340 TNS3Q68CZ2 1445 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 ATP2B1P20020 1258 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 RBL2Q08999 1139 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 RAD9BQ6WBX8 426 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 SYNE4Q8N205 404 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 AK7Q96M32 723 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 CDC23Q9UJX2 597 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 POTEB2H3BUK9 544 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 TUBB2AQ13885 445 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 WTAPQ15007 396 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 CCDC82Q8N4S0 544 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 CTAGE1Q96RT6 745 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 TUBB2BQ9BVA1 445 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 SEC31BQ9NQW1 1179 aa19.97■□□□□ 0.79
SYNE3-202ENST00000553340 TUBB4BP68371 445 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 USP49Q70CQ1 688 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 APTXQ7Z2E3 356 aaKnown RBP19.96■□□□□ 0.79
SYNE3-202ENST00000553340 CRACR2BQ8N4Y2 399 aaPredicted RBP19.96■□□□□ 0.79
SYNE3-202ENST00000553340 HNRNPLLQ8WVV9 542 aaKnown RBP19.96■□□□□ 0.79
SYNE3-202ENST00000553340 ERICH2A1L162 156 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 MAP2K7O14733 419 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 MBD4O95243 580 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 CTSWP56202 376 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 FILIP1LQ4L180 1135 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 RRP12Q5JTH9 1297 aaKnown RBP19.96■□□□□ 0.79
SYNE3-202ENST00000553340 CPLX3Q8WVH0 158 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 BBXQ8WY36 941 aaPredicted RBP19.96■□□□□ 0.79
SYNE3-202ENST00000553340 EXOC4Q96A65 974 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 TSPYL1Q9H0U9 437 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 TOMM22Q9NS69 142 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 SYNRGQ9UMZ2 1314 aa19.96■□□□□ 0.79
SYNE3-202ENST00000553340 MAP3K12Q12852 859 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 KLHL10Q6JEL2 608 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 TMTC2Q8N394 836 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 CABP5Q9NP86 173 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 STRN4Q9NRL3 753 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 ADD3Q9UEY8 706 aaKnown RBP19.95■□□□□ 0.78
SYNE3-202ENST00000553340 WDR17Q8IZU2 1322 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 GIGYF2Q6Y7W6 1299 aaKnown RBP19.95■□□□□ 0.78
SYNE3-202ENST00000553340 RASGRP2Q7LDG7 609 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 MAGEB6Q8N7X4 407 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 ZKSCAN3Q9BRR0 538 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 PSD3Q9NYI0 1048 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 PUF60Q9UHX1 559 aaKnown RBP19.95■□□□□ 0.78
SYNE3-202ENST00000553340 ADAM21Q9UKJ8 722 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 TACC3Q9Y6A5 838 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 CHD4Q14839 1912 aa19.95■□□□□ 0.78
SYNE3-202ENST00000553340 MFAP3LO75121 409 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 PBX1P40424 430 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 RAD51AP2Q09MP3 1159 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 ZNF569Q5MCW4 686 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 OXER1Q8TDS5 423 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 AATFQ9NY61 560 aaKnown RBP eCLIP19.94■□□□□ 0.78
SYNE3-202ENST00000553340 CAPN2P17655 700 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 GPTP24298 496 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 CNGA4Q8IV77 575 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 CMTR1Q8N1G2 835 aaKnown RBP19.94■□□□□ 0.78
SYNE3-202ENST00000553340 ANKZF1Q9H8Y5 726 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 ARMT1Q9H993 441 aa19.94■□□□□ 0.78
SYNE3-202ENST00000553340 SEMA3EO15041 775 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 ERLIN1O75477 346 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 AFMP43652 599 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 STX17P56962 302 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 SLC20A2Q08357 652 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 CUL4BQ13620 913 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 ZSCAN26Q16670 478 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 KIF4BQ2VIQ3 1234 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 CDKAL1Q5VV42 579 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 HDXQ7Z353 690 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 NLRP10Q86W26 655 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 SPATA5Q8NB90 893 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 STAG1Q8WVM7 1258 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 CCDC51Q96ER9 411 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 TRERF1Q96PN7 1200 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 NACAP1Q9BZK3 213 aa19.93■□□□□ 0.78
SYNE3-202ENST00000553340 RAB21Q9UL25 225 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms