RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 PCDH12Q9NPG4 1184 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 EXOC1Q9NV70 894 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 RABL2AQ9UBK7 228 aaPredicted RBP5.7□□□□□ -1.5
PFDN5-219ENST00000553171 BLOC1S6Q9UL45 172 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 ASAP1Q9ULH1 1129 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 NR2E3Q9Y5X4 410 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 EYSQ5T1H1 3165 aa5.7□□□□□ -1.5
PFDN5-219ENST00000553171 TMEM238LA0A1B0GVL6 79 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DYTNA2CJ06 578 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 IFRD1O00458 451 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 C21orf2O43822 256 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 PLIN1O60240 522 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 FKTNO75072 461 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 BBOX1O75936 387 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 ECEL1O95672 775 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 TBC1D8O95759 1140 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 VIL1P09327 827 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 RRM1P23921 792 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 TM4SF1P30408 202 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 PRPF4BQ13523 1007 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 KRT72Q14CN4 511 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 TAF11Q15544 211 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DNAJC21Q5F1R6 531 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DUSP27Q5VZP5 1158 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 AP1ARQ63HQ0 302 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 MCTP2Q6DN12 878 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 SMYD5Q6GMV2 418 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 NYAP1Q6ZVC0 841 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 C3orf67Q6ZVT6 689 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DAAM2Q86T65 1068 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 BRSK2Q8IWQ3 736 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 EFCAB13Q8IY85 973 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 GPC2Q8N158 579 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 KCNH5Q8NCM2 988 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 MAFAQ8NHW3 353 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 HDAC7Q8WUI4 952 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 PBXIP1Q96AQ6 731 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DUSP9Q99956 384 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 MAK16Q9BXY0 300 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 TRIM7Q9C029 511 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 TANGO6Q9C0B7 1094 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 AVENQ9NQS1 362 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DCAF16Q9NXF7 216 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 C6orf203Q9P0P8 240 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 CLIP2Q9UDT6 1046 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 STAP2Q9UGK3 403 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 PGAP2Q9UHJ9 254 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 POLG2Q9UHN1 485 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 MKL2Q9ULH7 1088 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 GNEQ9Y223 722 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 SLC45A1Q9Y2W3 748 aa5.69□□□□□ -1.5
PFDN5-219ENST00000553171 RTCBQ9Y3I0 505 aaKnown RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 ZNF330Q9Y3S2 320 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 KMT2BQ9UMN6 2715 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 ANKRD11Q6UB99 2663 aaPredicted RBP5.69□□□□□ -1.5
PFDN5-219ENST00000553171 SPTBN4Q9H254 2564 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 PIK3C2GO75747 1445 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 SETXQ7Z333 2677 aaKnown RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 LOC102724428A0A0B4J2F2 783 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 FSD2A1L4K1 749 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 WTIPA6NIX2 430 aaPredicted RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 FZD9O00144 591 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 KRT38O76015 456 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 BAG4O95429 457 aaKnown RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 RPN1P04843 607 aaKnown RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 SLC10A3P09131 477 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 HOXB3P14651 431 aaPredicted RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 PSMA3P25788 255 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 RFC4P35249 363 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 SIK1P57059 783 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 RWDD2BP57060 319 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 INHBEP58166 350 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 ITPK1Q13572 414 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 FXNQ16595 210 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 CCDC93Q567U6 631 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 ANKRD45Q5TZF3 282 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 CCSAPQ6IQ19 270 aaPredicted RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 SYNE3Q6ZMZ3 975 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 NCAPG2Q86XI2 1143 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 NPAS4Q8IUM7 802 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 PLPP6Q8IY26 295 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 TNPO1Q92973 898 aaKnown RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 ERP27Q96DN0 273 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 C8orf48Q96LL4 319 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 RASSF4Q9H2L5 321 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 RPAP3Q9H6T3 665 aaPredicted RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 CD248Q9HCU0 757 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 PCSK1NQ9UHG2 260 aa5.68□□□□□ -1.5
PFDN5-219ENST00000553171 XPO7Q9UIA9 1087 aaKnown RBP5.68□□□□□ -1.5
PFDN5-219ENST00000553171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.67□□□□□ -1.5
PFDN5-219ENST00000553171 CCDC163A0A0D9SF12 145 aa5.67□□□□□ -1.5
PFDN5-219ENST00000553171 F8VZ95 297 aa5.67□□□□□ -1.5
PFDN5-219ENST00000553171 MTRF1O75570 445 aaKnown RBP5.67□□□□□ -1.5
PFDN5-219ENST00000553171 RNASEH2AO75792 299 aaKnown RBP5.67□□□□□ -1.5
PFDN5-219ENST00000553171 HARSP12081 509 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms