RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 TMEM87BQ96K49 555 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 PLIN2Q99541 437 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 PRDM1O75626 825 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 PTPAQ15257 358 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 SPATA1Q5VX52 437 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 PSMB7Q99436 277 aa13.11□□□□□ -0.31
PPFIA2-227ENST00000552948 TULP2O00295 520 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 MYO1BO43795 1136 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 MUM1L1Q5H9M0 696 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 RNF40O75150 1001 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 MRPS25P82663 173 aaKnown RBP13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 TTC19Q6DKK2 380 aaPredicted RBP13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 TMTC1Q8IUR5 882 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 HPSEQ9Y251 543 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 H7C1W4 665 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 SRGAP2O75044 1071 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 NOA1Q8NC60 698 aaKnown RBP13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 CENPHQ9H3R5 247 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 SLC4A4Q9Y6R1 1079 aa13.1□□□□□ -0.31
PPFIA2-227ENST00000552948 E2F4Q16254 413 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 GSPT2Q8IYD1 628 aaKnown RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 UBN2Q6ZU65 1347 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 EIF3CLB5ME19 914 aaKnown RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 MNAT1P51948 309 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 STIM1Q13586 685 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 BEND6Q5SZJ8 279 aaPredicted RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 EIF3CQ99613 913 aaKnown RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 HDAC6Q9UBN7 1215 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 PXDNQ92626 1479 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 ANKRD18BA2A2Z9 1011 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 TRIM21P19474 475 aaKnown RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 RFX7Q2KHR2 1363 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
PPFIA2-227ENST00000552948 MFAP3LO75121 409 aa13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 LIG3P49916 1009 aa13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 SLC4A8Q2Y0W8 1093 aa13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 TMEM139Q8IV31 216 aa13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 PANX2Q96RD6 677 aa13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 TRIM10Q9UDY6 481 aa13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 LUC7L2Q9Y383 392 aaKnown RBP13.08□□□□□ -0.31
PPFIA2-227ENST00000552948 RIMBP3CA6NJZ7 1639 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 RIMBP3BA6NNM3 1639 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 RIMBP3Q9UFD9 1639 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 PTPREP23469 700 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 MCM7P33993 719 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 SYMPKQ92797 1274 aaKnown RBP13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 ANKZF1Q9H8Y5 726 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 TFR2Q9UP52 801 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 NEDD4P46934 1319 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 PDE6AP16499 860 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 WHAMMP3Q1A5X7 153 aa13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.32
PPFIA2-227ENST00000552948 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 FAM205CA6NFA0 338 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 SNAP23O00161 211 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 DEXIO95424 95 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 MMP1P03956 469 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 ITGA6P23229 1130 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 MCAMP43121 646 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 NR1I3Q14994 352 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 DHX37Q8IY37 1157 aaKnown RBP13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 PHKA1P46020 1223 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 CCT5P48643 541 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 NLRP5P59047 1200 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 KRT23Q9C075 422 aa13.07□□□□□ -0.32
PPFIA2-227ENST00000552948 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms