RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
MMP19-209ENST00000552872 NMT2O60551 498 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
MMP19-209ENST00000552872 GNAT2P19087 354 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 NUCB2P80303 420 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
MMP19-209ENST00000552872 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
MMP19-209ENST00000552872 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 H7C1D1 291 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
MMP19-209ENST00000552872 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
MMP19-209ENST00000552872 PRKG1Q13976 671 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 CYB5R4Q7L1T6 521 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 CLEC10AQ8IUN9 316 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 OSBPL5Q9H0X9 879 aaPredicted RBP11.93□□□□□ -0.5
MMP19-209ENST00000552872 GGA3Q9NZ52 723 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 ZBTB22O15209 634 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 RANBP6O60518 1105 aaKnown RBP11.93□□□□□ -0.5
MMP19-209ENST00000552872 KDM4AO75164 1064 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 FMR1Q06787 632 aaKnown RBP eCLIP11.93□□□□□ -0.5
MMP19-209ENST00000552872 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 ATP8A2Q9NTI2 1148 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 CTNNA3Q9UI47 895 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 LAMB1P07942 1786 aa11.93□□□□□ -0.5
MMP19-209ENST00000552872 DDX60LQ5H9U9 1706 aaKnown RBP11.92□□□□□ -0.5
MMP19-209ENST00000552872 POTECB2RU33 542 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 LMOD1P29536 600 aaPredicted RBP11.92□□□□□ -0.5
MMP19-209ENST00000552872 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 RNF20Q5VTR2 975 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 TSC1Q92574 1164 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 DPF2Q92785 391 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 MTMR7Q9Y216 660 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 PLCG2P16885 1265 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 RPS12P25398 132 aaKnown RBP11.92□□□□□ -0.5
MMP19-209ENST00000552872 HDLBPQ00341 1268 aaKnown RBP11.92□□□□□ -0.5
MMP19-209ENST00000552872 C12orf60Q5U649 245 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 NMRK2Q9NPI5 230 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
MMP19-209ENST00000552872 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
MMP19-209ENST00000552872 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 MYO1BO43795 1136 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 ANTXR2P58335 489 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 STK3Q13188 491 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 RASA3Q14644 834 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 MFSD6Q6ZSS7 791 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 ZBED3Q96IU2 234 aaPredicted RBP11.91□□□□□ -0.5
MMP19-209ENST00000552872 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 SIPA1L1O43166 1804 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 RXRAP19793 462 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 AK2P54819 239 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 ALX1Q15699 326 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
MMP19-209ENST00000552872 AKNAD1Q5T1N1 836 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 BLOC1S2Q6QNY1 142 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 DNAJC18Q9H819 358 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 TMOD2Q9NZR1 351 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
MMP19-209ENST00000552872 GDF11O95390 407 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 LARGE1O95461 756 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 EPHX2P34913 555 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 GTF2F1P35269 517 aaKnown RBP eCLIP11.9□□□□□ -0.5
MMP19-209ENST00000552872 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
MMP19-209ENST00000552872 RABEP1Q15276 862 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 Q6ZUG5 572 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 CCDC84Q86UT8 332 aaPredicted RBP11.9□□□□□ -0.5
MMP19-209ENST00000552872 TICAM2Q86XR7 235 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 KCNB2Q92953 911 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 ARPP21Q9UBL0 812 aaPredicted RBP11.9□□□□□ -0.5
MMP19-209ENST00000552872 MYH8P13535 1937 aa11.9□□□□□ -0.5
MMP19-209ENST00000552872 HMGN5P82970 282 aaKnown RBP11.9□□□□□ -0.51
MMP19-209ENST00000552872 RALYLQ86SE5 291 aaKnown RBP11.9□□□□□ -0.51
MMP19-209ENST00000552872 MRIQ9BWK5 157 aa11.9□□□□□ -0.51
MMP19-209ENST00000552872 DEFB129Q9H1M3 183 aa11.9□□□□□ -0.51
MMP19-209ENST00000552872 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.51
MMP19-209ENST00000552872 CYP46A1Q9Y6A2 500 aa11.9□□□□□ -0.51
MMP19-209ENST00000552872 PRC1O43663 620 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 RPS6KB1P23443 525 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 CDK8P49336 464 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 JAG1P78504 1218 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
MMP19-209ENST00000552872 CCDC144CPQ8IYA2 1237 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
MMP19-209ENST00000552872 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
MMP19-209ENST00000552872 MPHOSPH10O00566 681 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms