RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 DNAI1Q9UI46 699 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 PRDM4Q9UKN5 801 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 NAP1L2Q9ULW6 460 aaPredicted RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 HPS5Q9UPZ3 1129 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 COL5A3P25940 1745 aaPredicted RBP6.18□□□□□ -1.42
CCNT1-204ENST00000551989 PNPLA7Q6ZV29 1317 aa6.18□□□□□ -1.42
CCNT1-204ENST00000551989 A0A1B0GVL5 298 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 DPYSL4O14531 572 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 PDE8AO60658 829 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 PDE8BO95263 885 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 SMC2O95347 1197 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 DEXIO95424 95 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 FMNL1O95466 1100 aaPredicted RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 SLC5A1P13866 664 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 PIP4K2AP48426 406 aaPredicted RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 CTSWP56202 376 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 ETF1P62495 437 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 FANCCQ00597 558 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 CEBPZQ03701 1054 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 SSRP1Q08945 709 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 MAP3K12Q12852 859 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 COL9A3Q14050 684 aaPredicted RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 NCAPHQ15003 741 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 PTPAQ15257 358 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 PUM3Q15397 648 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 FAM98CQ17RN3 349 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 DPCR1Q3MIW9 517 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 NT5DC1Q5TFE4 455 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 JAKMIP3Q5VZ66 844 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 KRT40Q6A162 431 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 TMC6Q7Z403 805 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 NBPF11Q86T75 865 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 FAM177A1Q8N128 213 aaPredicted RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 VGLL2Q8N8G2 317 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 KRI1Q8N9T8 703 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 MLKLQ8NB16 471 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 LPIN2Q92539 896 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 PPP1R13BQ96KQ4 1090 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 XPO4Q9C0E2 1151 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 ZBTB3Q9H5J0 574 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 NCOA5Q9HCD5 579 aaKnown RBP6.17□□□□□ -1.42
CCNT1-204ENST00000551989 RIPOR2Q9Y4F9 1068 aa6.17□□□□□ -1.42
CCNT1-204ENST00000551989 DISP2A7MBM2 1401 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 ERICH2A1L162 156 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 GOLGA8AA7E2F4 631 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 EFCAB8A8MWE9 144 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 PATL2C9JE40 543 aaKnown RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 FOXP2O15409 715 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 STX10O60499 249 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 TUBBP07437 444 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 TOP1P11387 765 aaKnown RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 ERCC5P28715 1186 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 MCAMP43121 646 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 ZAP70P43403 619 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 UBASH3AP57075 661 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC93Q567U6 631 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 E4F1Q66K89 784 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 LDHAL6AQ6ZMR3 332 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 KRBA2Q6ZNG9 492 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 NUTM2AQ8IVF1 878 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 VSTM4Q8IW00 320 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 MPNDQ8N594 471 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CNNM3Q8NE01 707 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 STAG1Q8WVM7 1258 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 AIDAQ96BJ3 306 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CCDC51Q96ER9 411 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CTAGE1Q96RT6 745 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 RNF26Q9BY78 433 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 TMX1Q9H3N1 280 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CNNM1Q9NRU3 951 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 FAM53CQ9NYF3 392 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 IFNKQ9P0W0 207 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 SEPT9Q9UHD8 586 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CLIC4Q9Y696 253 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 NDUFB9Q9Y6M9 179 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 STRCQ7RTU9 1775 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 BCL9O00512 1426 aa6.16□□□□□ -1.42
CCNT1-204ENST00000551989 CACNA1SQ13698 1873 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 BAZ2AQ9UIF9 1905 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 TNRC6CQ9HCJ0 1690 aaKnown RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 SERPINC1P01008 464 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 MMP1P03956 469 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 A1BGP04217 495 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 POLR3DP05423 398 aaPredicted RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 CALM1P0DP23 149 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 CALM2P0DP24 149 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 CALM3P0DP25 149 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 H2AFXP16104 143 aaPredicted RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 PDE6AP16499 860 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 FGFR2P21802 821 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 ITGA6P23229 1130 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 HOXA7P31268 230 aaPredicted RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 IL6STP40189 918 aaPredicted RBP6.15□□□□□ -1.42
CCNT1-204ENST00000551989 CBX1P83916 185 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 GUCY1B3Q02153 619 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 KCNC4Q03721 635 aa6.15□□□□□ -1.42
CCNT1-204ENST00000551989 SPAG1Q07617 926 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms