RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 RUFY2Q8WXA3 655 aa18.09■□□□□ 0.49
SMARCD1-211ENST00000551497 INCENPQ9NQS7 918 aa18.09■□□□□ 0.49
SMARCD1-211ENST00000551497 SGSM2O43147 1006 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 GH2P01242 217 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 PTH1RQ03431 593 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 PPARAQ07869 468 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 MS4A4AQ96JQ5 239 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 SWAP70Q9UH65 585 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 TACC3Q9Y6A5 838 aa18.08■□□□□ 0.48
SMARCD1-211ENST00000551497 PPIL2Q13356 520 aa18.07■□□□□ 0.48
SMARCD1-211ENST00000551497 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
SMARCD1-211ENST00000551497 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
SMARCD1-211ENST00000551497 AFG3L2Q9Y4W6 797 aa18.07■□□□□ 0.48
SMARCD1-211ENST00000551497 PRDM1O75626 825 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 ASNSP08243 561 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 AKR1B1P15121 316 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 GUCY1A2P33402 732 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 TM4SF4P48230 202 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 HAND2P61296 217 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 ESYT1Q9BSJ8 1104 aa18.06■□□□□ 0.48
SMARCD1-211ENST00000551497 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 RAD50Q92878 1312 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 MANSC4A6NHS7 340 aaPredicted RBP18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 USP17L5A8MUK1 530 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 MPHOSPH10O00566 681 aaKnown RBP18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 CDC45O75419 566 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 RASA1P20936 1047 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 SPP2Q13103 211 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 SEPT2Q15019 361 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 BRI3BPQ8WY22 251 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 PTPN18Q99952 460 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 DSCC1Q9BVC3 393 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 MKNK2Q9HBH9 465 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 WBP1LQ9NX94 342 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 KCNH4Q9UQ05 1017 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
SMARCD1-211ENST00000551497 TESPA1A2RU30 521 aaPredicted RBP18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 TRIM75PA6NK02 468 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 GTF2A2P52657 109 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 SNAPC2Q13487 334 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 CCDC17Q96LX7 622 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 NBPF3Q9H094 633 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 CABP5Q9NP86 173 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 ANAPC4Q9UJX5 808 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 TAOK2Q9UL54 1235 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 ATAD5Q96QE3 1844 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 ROBO3Q96MS0 1386 aa18.04■□□□□ 0.48
SMARCD1-211ENST00000551497 CCL15-CCL14A0A0B4J2E2 113 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 CXCL11O14625 94 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 MOGSQ13724 837 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 CCL15Q16663 113 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 IFNL1Q8IU54 200 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 CLEC10AQ8IUN9 316 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 TNS4Q8IZW8 715 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 ZNF280CQ8ND82 737 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 WDR18Q9BV38 432 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 GINM1Q9NU53 330 aa18.03■□□□□ 0.48
SMARCD1-211ENST00000551497 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 IGF2BP3O00425 579 aaKnown RBP eCLIP18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 ZNF213O14771 459 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 CAPN15O75808 1086 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 SLC3A2P08195 630 aaKnown RBP18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 CETPP11597 493 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 INHBEP58166 350 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 PDE4BQ07343 736 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 SREBF2Q12772 1141 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 DGKZQ13574 1117 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 SIAH1Q8IUQ4 282 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 REM2Q8IYK8 340 aaPredicted RBP18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 ZNF444Q8N0Y2 327 aaPredicted RBP18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 ACER1Q8TDN7 264 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 RNF186Q9NXI6 227 aa18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.02■□□□□ 0.48
SMARCD1-211ENST00000551497 PCNTO95613 3336 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 ZMYM6O95789 1325 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 TRPA1O75762 1119 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 FAM47AQ5JRC9 791 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 KIAA1211Q6ZU35 1233 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 TMEM179Q6ZVK1 233 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 TBC1D10CQ8IV04 446 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 NKX2-3Q8TAU0 364 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 LSG1Q9H089 658 aaKnown RBP18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 AS3MTQ9HBK9 375 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 CTNNA3Q9UI47 895 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 THSD7BQ9C0I4 1608 aa18.01■□□□□ 0.47
SMARCD1-211ENST00000551497 MYH8P13535 1937 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 LAMB1P07942 1786 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 A0A0G2JLL6 359 aaPredicted RBP18■□□□□ 0.47
SMARCD1-211ENST00000551497 BTBD19C9JJ37 291 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 FGRP09769 529 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 HSPA1AP0DMV8 641 aaKnown RBP18■□□□□ 0.47
SMARCD1-211ENST00000551497 HSPA1BP0DMV9 641 aaKnown RBP18■□□□□ 0.47
SMARCD1-211ENST00000551497 TFAP4Q01664 338 aa18■□□□□ 0.47
SMARCD1-211ENST00000551497 MTMR2Q13614 643 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms