RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ANP32BQ92688 251 aaKnown RBP13.35□□□□□ -0.27
RAB5C-208ENST00000551338 DYNLL2Q96FJ2 89 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 FAM163AQ96GL9 167 aaPredicted RBP13.35□□□□□ -0.27
RAB5C-208ENST00000551338 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAB5C-208ENST00000551338 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 MRVI1Q9Y6F6 885 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 CNTNAP5Q8WYK1 1306 aa13.35□□□□□ -0.27
RAB5C-208ENST00000551338 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 A0A1W2PQ27 194 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 A0A1W2PQ64 194 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 A0A1W2PQD8 194 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 RIMBP2O15034 1052 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 SPTLC2O15270 562 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 NMT2O60551 498 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 PLEKHA8P1O95397 391 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 MMP1P03956 469 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 CALM1P0DP23 149 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 CALM2P0DP24 149 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 CALM3P0DP25 149 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 ME1P48163 572 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 NT5C2P49902 561 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 RHBDL3P58872 404 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 TYRO3Q06418 890 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 SLC4A8Q2Y0W8 1093 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 RCSD1Q6JBY9 416 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 MPNDQ8N594 471 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 FSIP1Q8NA03 581 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
RAB5C-208ENST00000551338 RRAGDQ9NQL2 400 aaPredicted RBP13.34□□□□□ -0.27
RAB5C-208ENST00000551338 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
RAB5C-208ENST00000551338 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
RAB5C-208ENST00000551338 TSPY2A6NKD2 308 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 PRPF3O43395 683 aaKnown RBP13.33□□□□□ -0.28
RAB5C-208ENST00000551338 CCDC192P0DO97 292 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 GTF2IP78347 998 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
RAB5C-208ENST00000551338 PTPAQ15257 358 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 PKN1Q16512 942 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 ADALQ6DHV7 355 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 MRPS27Q92552 414 aaKnown RBP13.33□□□□□ -0.28
RAB5C-208ENST00000551338 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
RAB5C-208ENST00000551338 TAOK2Q9UL54 1235 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 DAGLAQ9Y4D2 1042 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 FLT1P17948 1338 aa13.33□□□□□ -0.28
RAB5C-208ENST00000551338 PLCG2P16885 1265 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 FAM160A1Q05DH4 1040 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
RAB5C-208ENST00000551338 EZH2Q15910 746 aaKnown RBP13.32□□□□□ -0.28
RAB5C-208ENST00000551338 AXDND1Q5T1B0 1012 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-208ENST00000551338 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-208ENST00000551338 C2CD5Q86YS7 1000 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 SLF2Q8IX21 1173 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
RAB5C-208ENST00000551338 CCDC82Q8N4S0 544 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 MAP3K14Q99558 947 aa13.32□□□□□ -0.28
RAB5C-208ENST00000551338 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
RAB5C-208ENST00000551338 BTBD18B2RXH4 712 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 CTAGE5O15320 804 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 RASA1P20936 1047 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 PLCD1P51178 756 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 TFAP4Q01664 338 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 GNL2Q13823 731 aaKnown RBP13.31□□□□□ -0.28
RAB5C-208ENST00000551338 SLC15A2Q16348 729 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-208ENST00000551338 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-208ENST00000551338 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 ZC3H12CQ9C0D7 883 aaKnown RBP13.31□□□□□ -0.28
RAB5C-208ENST00000551338 FOXP1Q9H334 677 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-208ENST00000551338 IL17RBQ9NRM6 502 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 SUGT1Q9Y2Z0 365 aa13.31□□□□□ -0.28
RAB5C-208ENST00000551338 PPP6R2O75170 966 aa13.3□□□□□ -0.28
RAB5C-208ENST00000551338 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-208ENST00000551338 SAFBQ15424 915 aaKnown RBP eCLIP13.3□□□□□ -0.28
RAB5C-208ENST00000551338 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
RAB5C-208ENST00000551338 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
RAB5C-208ENST00000551338 DGKHQ86XP1 1220 aa13.3□□□□□ -0.28
RAB5C-208ENST00000551338 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
RAB5C-208ENST00000551338 SRBD1Q8N5C6 995 aaKnown RBP13.3□□□□□ -0.28
RAB5C-208ENST00000551338 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-208ENST00000551338 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
RAB5C-208ENST00000551338 TCP11L1Q9NUJ3 509 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms