RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 CCAR1Q8IX12 1150 aaKnown RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 BADQ92934 168 aa12.7□□□□□ -0.38
BEST3-210ENST00000551160 PRDM5Q9NQX1 630 aaPredicted RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 PA2G4Q9UQ80 394 aaKnown RBP12.7□□□□□ -0.38
BEST3-210ENST00000551160 ATP11BQ9Y2G3 1177 aa12.7□□□□□ -0.38
BEST3-210ENST00000551160 DNM1LO00429 736 aa12.69□□□□□ -0.38
BEST3-210ENST00000551160 MAP2K5Q13163 448 aa12.69□□□□□ -0.38
BEST3-210ENST00000551160 MFSD14CQ5VZR4 134 aa12.69□□□□□ -0.38
BEST3-210ENST00000551160 SPTY2D1Q68D10 685 aaPredicted RBP12.69□□□□□ -0.38
BEST3-210ENST00000551160 LPAR1Q92633 364 aa12.69□□□□□ -0.38
BEST3-210ENST00000551160 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
BEST3-210ENST00000551160 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
BEST3-210ENST00000551160 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
BEST3-210ENST00000551160 TNFRSF10AO00220 468 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 ZBTB22O15209 634 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 CNMDO75829 334 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 CNGA1P29973 690 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 TRIM60Q495X7 471 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 TJAP1Q5JTD0 557 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 GJC2Q5T442 439 aaPredicted RBP12.68□□□□□ -0.38
BEST3-210ENST00000551160 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 ERICH6Q7L0X2 663 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 TRPV1Q8NER1 839 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
BEST3-210ENST00000551160 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
BEST3-210ENST00000551160 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 MYH13Q9UKX3 1938 aa12.68□□□□□ -0.38
BEST3-210ENST00000551160 GDF11O95390 407 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 CYP2C19P33261 490 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
BEST3-210ENST00000551160 TIMM10P62072 90 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 EDC3Q96F86 508 aaKnown RBP12.67□□□□□ -0.38
BEST3-210ENST00000551160 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
BEST3-210ENST00000551160 MYH2Q9UKX2 1941 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 PTPRCP08575 1304 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 TRIM43BA6NCK2 446 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 C19orf81C9J6K1 198 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 MSCO60682 206 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 ASNSP08243 561 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 GRIN2CQ14957 1233 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 SLC39A5Q6ZMH5 540 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 NPLOC4Q8TAT6 608 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
BEST3-210ENST00000551160 GTF3C2Q8WUA4 911 aaPredicted RBP12.66□□□□□ -0.38
BEST3-210ENST00000551160 TRIM43Q96BQ3 446 aaPredicted RBP12.66□□□□□ -0.38
BEST3-210ENST00000551160 NSUN4Q96CB9 384 aaKnown RBP12.66□□□□□ -0.38
BEST3-210ENST00000551160 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
BEST3-210ENST00000551160 LTBP2Q14767 1821 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 CYBAP13498 195 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 ITGB8P26012 769 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 EPHB4P54760 987 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
BEST3-210ENST00000551160 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
BEST3-210ENST00000551160 TMEM265A0A087WTH1 108 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 MAP4K4O95819 1239 aaPredicted RBP12.64□□□□□ -0.39
BEST3-210ENST00000551160 IGHA2P01877 340 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
BEST3-210ENST00000551160 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
BEST3-210ENST00000551160 PTPREP23469 700 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 PLA2G5P39877 138 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 GSTO1P78417 241 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 GRB14Q14449 540 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 SNX17Q15036 470 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 ZYXQ15942 572 aaKnown RBP12.64□□□□□ -0.39
BEST3-210ENST00000551160 SSH1Q8WYL5 1049 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 MRS2Q9HD23 443 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
BEST3-210ENST00000551160 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
BEST3-210ENST00000551160 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
BEST3-210ENST00000551160 LDHCP07864 332 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 HOXC6P09630 235 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 CCNA1P78396 465 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
BEST3-210ENST00000551160 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 MAPKAPK5Q8IW41 473 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
BEST3-210ENST00000551160 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 DNAH12Q6ZR08 3092 aa12.63□□□□□ -0.39
BEST3-210ENST00000551160 DNAJB2P25686 324 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms